Colwellia sp. PAMC 20917: A3Q34_19420
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Entry
A3Q34_19420 CDS
T04511
Name
(GenBank) ABC transporter
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
coz
Colwellia sp. PAMC 20917
Pathway
coz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
coz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
A3Q34_19420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coz02000
]
A3Q34_19420
02044 Secretion system [BR:
coz02044
]
A3Q34_19420
Transporters [BR:
coz02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
A3Q34_19420
Secretion system [BR:
coz02044
]
Type I secretion system
Adhesin protein transporter
A3Q34_19420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
Peptidase_C39
SMC_N
AAA_15
AAA_13
Zeta_toxin
AAA_22
nSTAND3
AAA_29
CAL67264-like
AAA_23
NACHT
DLIC
AAA_5
AAA_24
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AOW78818
LinkDB
All DBs
Position
4554588..4556762
Genome browser
AA seq
724 aa
AA seq
DB search
MQSTVQQSTQWTINASQKLSSDPLLDSLVLITEHYGNPCSPEALAAGLPLTGANLTPELL
PQAASRAGLSAKLVRKGLNELPSMLLPCILMLKDKKALVLQELDIEKNIATVSLPETGGE
EQLTIEELESSFVGYLFLIKQQYRGDRNFDVHLNSSKEHWLWQKIKNTSSIYRDVIIASV
MINIFALVSPLFVMNIYDKVIPNLAFESLWVLAIGAGVAYIFDFILKQLRGYLIDVAGKK
IDIEVSSKLFAKVIGIPLEKRSPSVGGMAKQLSEFDSVREFLSSATISALVDLPFAVLFM
FCIWLVAGDLVMFPIIASILIIGYTLLNQSKLRKAIEESNKFSGLRHGHLIECLSALESI
KANGAEGVVQRAWQQMVGHTSTWLLKSKMITNSVLNFASFIVQISVVAVVVLGVYRVSEN
LISMGGIIAAVMLTGRAISPIAKLAGLMTRSNQTLSALKQLDTLMEQEGEFEDKAHLVSR
TKLSGNINAENISFKYPNAESDSLQPMSVKINQGERIAIVGHNGSGKTTLAKLLLGLYQP
SKGSIQFDGLNHRQIHPSDLRKNIGYLPQDIVLFHGTIRDNILFGTRQVTEYQLIRAVQL
SGVSAFTDHNSQGLDQQVGESGSALSRGQRQSIVLARAILNSPQILLLDEPTASLDARAE
KKFIEAINATAKDRTMLLITHKMDLLKLVDRILVLDKGKLIIDGPKDKVLAQLKGENLNQ
EANL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtgcaatcaacagtgcaacagtcaactcaatggacaattaacgcttcacaaaagttaagt
tcagaccctctgttagacagtttagtgcttataacagagcattatggtaacccgtgctct
cctgaagcgcttgcggctggtttaccacttactggtgctaatcttacacccgagctgtta
cctcaagcagcatctcgcgcagggttaagtgcaaaattagtgcgtaaaggcttaaatgaa
ttaccctcaatgttgttaccttgtattttgatgctgaaagataaaaaagccttagtatta
caagaactagatattgaaaaaaatatagcaacagtttctttacctgaaactggcggtgaa
gaacagctaactattgaggaattagaatcgagttttgttggctatttatttttaataaag
cagcaatatcgcggtgatagaaatttcgatgttcatcttaatagttcaaaagaacattgg
ttatggcagaaaattaagaatacttcatcgatatatcgagatgtgattattgcatcagta
atgatcaatatttttgctctggtatcaccactttttgtgatgaatatttatgacaaagtg
atacctaatctcgctttcgaatcactttgggtactagccattggtgccggtgtcgcttat
atctttgattttattttaaaacaacttcgtggttatctaattgatgttgcgggcaagaaa
attgatattgaagtttcttcaaaactatttgctaaagtaattggtataccgcttgaaaaa
cgctccccaagtgtcggtggaatggcaaagcagctgagtgaatttgacagtgtcagagag
tttttgtcttctgcgacaataagtgccttagttgacttaccttttgctgtgctttttatg
ttttgtatttggcttgttgcaggagacttagtgatgtttccaattattgcctcaatactt
atcattggctacaccttgttaaatcaatctaaacttcgtaaagcgatagaagaaagtaat
aagttttcgggtttacgccatggacatctgatcgagtgtttaagcgctttagaatctatt
aaagctaatggcgccgaaggtgttgtgcaaagagcatggcagcaaatggttggtcatacc
tcgacctggttacttaaatctaaaatgatcactaattcggtgttaaattttgcgagtttt
attgtacaaatatcagtagtcgccgttgtagtgttaggtgtctatcgagtatccgaaaat
ttaatctctatggggggaattatagcggctgttatgttaaccggtcgtgctatatctcct
attgctaagcttgctggcctaatgacgcgctctaatcaaaccttaagtgctttgaaacaa
cttgatactttaatggagcaagaaggcgaatttgaagacaaagctcatttggtaagtcgg
acaaaactcagtggcaatataaatgctgaaaatatcagttttaagtaccctaatgcagaa
agcgactctttgcagccaatgtcagtaaaaattaatcaaggagaaagaattgccattgtt
ggtcataatggttcgggtaaaacaacgctagctaaattactattaggtctttatcagcca
agcaagggtagcattcaatttgatggtttaaatcaccggcaaattcatcctagcgatttg
cgaaaaaacattggctatttaccacaagatattgtcttatttcatggtaccatccgcgac
aacatcctcttcggtactcgtcaagttactgaatatcaacttattagagcggttcaactg
tctggtgtcagtgcttttaccgatcataatagtcaaggccttgaccaacaagtgggggaa
agtggtagtgcattatcacgtggccagagacagtcaattgttttagccagagcgatatta
aattcacctcaaatattactgttagatgagccaaccgcgagtcttgatgctcgtgctgaa
aagaagtttattgaagcaatcaatgcaacggcaaaagatcgcactatgttattaattacc
cataaaatggatttattaaaattggttgaccgcattcttgttttagataaaggtaaattg
attattgacggtccaaaagataaagtattagcgcaactcaaaggcgaaaatttaaatcaa
gaggcgaacttatga
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