Colwellia sp. PAMC 20917: A3Q34_19645
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Entry
A3Q34_19645 CDS
T04511
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
coz
Colwellia sp. PAMC 20917
Pathway
coz00061
Fatty acid biosynthesis
coz00071
Fatty acid degradation
coz01100
Metabolic pathways
coz01212
Fatty acid metabolism
coz02024
Quorum sensing
coz04146
Peroxisome
Module
coz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
coz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
A3Q34_19645
00071 Fatty acid degradation
A3Q34_19645
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
A3Q34_19645
09145 Cellular community - prokaryotes
02024 Quorum sensing
A3Q34_19645
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
coz01004
]
A3Q34_19645
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
coz04147
]
A3Q34_19645
Enzymes [BR:
coz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
A3Q34_19645
Lipid biosynthesis proteins [BR:
coz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
A3Q34_19645
Exosome [BR:
coz04147
]
Exosomal proteins
Exosomal proteins of breast milk
A3Q34_19645
Exosomal proteins of breast cancer cells
A3Q34_19645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
TTC3_9th
AMP-binding_C_2
Benyvirus_P25
Motif
Other DBs
NCBI-ProteinID:
AOW78861
LinkDB
All DBs
Position
4612877..4614544
Genome browser
AA seq
555 aa
AA seq
DB search
MEKIWLEKSYPPGVDFEIDPDKYNSLADLFTKYTKLYQDNTAFINMGASISYQELGQQAH
DFAAYLQQDLGLVKGDRFAIMIPNLLQYPIALFGALLAGLTVVNVNPLYTARELEHQLKD
SGTKAILILENFAHVLEKVIDKTDVKHIVLTAVGDRLGAVKGLLINSVLRHVKKQVPAFN
FPGAVRFNQAMTKGAKLTFKPVKVVGSDLAFLQYTGGTTGPSKGAMLTHRNMVANLEQSN
AATKNIYEVGKEIMVTALPLYHVYALTSNCLCFMPFGGTNILITNPRDMKGFVKELAKYP
FTIITGVNTLFNALLHTPGFDQLDFSPLKLGFGGGMSVQRPVAELWEKVTKTRLLEGYGL
TECAPLVTMSPFNQQSYNGSIGLPVSSTDIRLIGDDGQEVALGEPGEMWVKGPQVMKGYH
NRPDATDEVLKDGWLATGDIATMDENGFFKIVDRKKDMINVSGFNVFPNEIEEVLVMHDG
VLEAAAIGIPHDTTGEAVKVFIVRKNPNLAEQDIFDHCHEMLTNYKRPKLIEFIDELPKS
NVGKVLRKELRKDVA
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatttggcttgaaaagagttacccacctggtgttgatttcgaaatagaccca
gataaatataactcattagcagatttatttactaaatatactaagttatatcaagataac
accgcttttattaatatgggagcaagcattagttatcaagaacttggtcaacaagctcat
gactttgcggcttatttacaacaagatttaggattagttaaaggtgatagattcgcgatt
atgatccccaatcttcttcaataccctattgcattatttggtgccttattagctggactt
accgtggtgaatgttaacccgttatacacagcacgcgaattagagcatcagttaaaagac
tcaggcactaaagctattctcatcctcgagaatttcgcccatgtccttgaaaaagttatt
gataaaaccgatgttaaacatattgttcttacggctgtaggcgacaggttaggggcagtt
aaggggttacttattaacagtgtccttaggcatgttaaaaagcaggtgcctgcttttaat
tttcctggagcagtcaggtttaatcaagcgatgacaaaaggagctaaattaacctttaag
cctgtcaaagtggttggttcagatctagctttcttacaatataccggtggtacgacgggt
ccatcaaaaggagccatgcttacccatcgcaatatggtggctaaccttgaacaatcaaat
gcagcgactaaaaatatatatgaagttggcaaagaaattatggtgacagccttaccgctt
tatcatgtctatgcgctaacgtctaattgcttatgttttatgccttttggcggtactaat
attttaattaccaatccaagagatatgaaaggctttgttaaagagctcgctaaataccct
tttactattatcacgggtgtaaatactttgtttaatgctttattacataccccagggttt
gaccaacttgattttagcccattaaaacttggttttggtggcggaatgtcagtacaacgt
ccggtagccgagctttgggaaaaagtcactaaaacaagattgttagaaggttatggttta
acagagtgtgcgccattagtgacgatgagcccttttaatcaacaaagctataatggctct
attggtttacctgtttcttcgaccgatattcgcttaattggcgatgatggtcaggaagtt
gcgctaggtgagcctggtgaaatgtgggttaaaggtcctcaggtgatgaaaggttatcac
aaccgacccgatgcaacagatgaagtgctcaaagatggttggctagctactggcgatatt
gccaccatggatgaaaatggcttttttaaaattgttgaccgaaaaaaagacatgatcaac
gtctcaggttttaatgtttttcctaatgaaattgaagaagtactcgttatgcatgatggt
gtacttgaagcagctgctattggtattccacacgatacaacaggagaagcggttaaggtt
tttattgtcaggaaaaatcctaatttagcagagcaagatatatttgatcattgtcatgaa
atgctaacaaactataaacgtcctaagttgatagagttcatcgatgagttgccaaaaagt
aatgtcggtaaagtgttacgaaaagagttacgtaaagacgttgcataa
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