Chlamydophila parapsittaci: FI836_00170
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Entry
FI836_00170 CDS
T09727
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cpaa
Chlamydophila parapsittaci
Brite
KEGG Orthology (KO) [BR:
cpaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpaa03032
]
FI836_00170 (gyrB)
03400 DNA repair and recombination proteins [BR:
cpaa03400
]
FI836_00170 (gyrB)
Enzymes [BR:
cpaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FI836_00170 (gyrB)
DNA replication proteins [BR:
cpaa03032
]
Prokaryotic type
DNA Topoisomerases
FI836_00170 (gyrB)
DNA repair and recombination proteins [BR:
cpaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FI836_00170 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
UPF0257
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QDE36767
UniProt:
A0ABX5VX00
LinkDB
All DBs
Position
39775..42195
Genome browser
AA seq
806 aa
AA seq
DB search
MDAKEKNYDASAITVLEGLQAVRERPGMYIGDTGITGLHHLVYEVVDNSIDEAMAGYCSE
IHVRILEDGGITISDNGRGIPIQTHEKESKKQGRDVSALEVVLTVLHAGGKFDKDSYKVS
GGLHGVGVSCVNALAEKLVATVYKDKQAYQMEFSRGVPVTGLQLLGATDKQGTEITFYPD
NKIFSSCVFDRSILIKRLRELAFLNRGITIIFEDDRDVSFDKVIFFYEGGIQSFVSYLNQ
NKESLFPEPIYISGSRTGDDGDIEFEAALQWNSGYSELIYSYANNIPTRQGGTHLTGFST
ALTRVLNAYIKAHNLAKNDKLSLTGEDIREGLTAVVSVKVPNPQFEGQTKQKLGNSDVGS
VSQQITGEALTIFFDENPQIAKMIVEKVFIAAQAREAAKKARELTLRKSALDSARLPGKL
IDCLEKDPAKCEMYIVEGDSAGGSAKQGRDRRFQAILPIRGKILNVEKARLQKIFQNQEI
GTIIAALGCGIGSDNFNLGKLRYRRIIIMTDADVDGSHIRTLLLTFFYRHMTALIENECV
YIAQPPLYKVSKKKDFRYILSEKEMDDYLLTLGVCDSKLVFKNGDREISGEALDSFVKLI
LNIENFIVALEKKAVPFSEFLEMRKETLGYPLYYSPPQSGKQGGRYFYSSEEKEEEMASR
EDADSMKVIELYKTSIFAEIQEELRDYGLDIRHYLNPKDSEMVITNEDSKTLPYTCYTLK
EVIDHLKALGRKGIEIQRYKGLGEMNADQLWDTTMNPEQRTLVRVSLKDAVEADHIFTML
MGEEVPPRREFIENHALSVKMNNLDI
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaaaagaaaaaaattatgacgcctcagctatcactgttttagaagggcttcaa
gccgttcgtgagcgtcctggaatgtatataggagatactgggatcacagggcttcatcac
ttagtgtatgaggttgtagacaacagtatcgacgaagccatggcgggttattgttctgaa
atccatgtaaggattttagaagatggtggaattactatctctgacaatggtcgaggtatt
ccaattcagacccatgaaaaggaatcgaaaaaacaaggtagagatgtttccgcattagag
gttgttctcacggtcctgcatgctggaggaaaatttgataaggatagctataaagtatcc
ggaggtttgcacggtgtcggagtttcttgcgttaacgccctggctgaaaaattagtagcc
acagtatacaaagataagcaagcttatcagatggagttttccagaggagttcctgtaact
ggtttgcagttgttaggagctaccgataagcagggaacagaaatcactttctacccagat
aataagatcttttcttcatgtgtttttgatcgctctatcttaattaaaaggttgcgagag
cttgcatttttgaatcgtggtataacgatcatttttgaagatgatcgtgacgtcagtttt
gataaagtcatctttttctacgaaggaggtattcaatccttcgttagttatttaaaccaa
aataaagaaagtcttttcccagaaccaatttatatttcaggaagtcgaactggagatgat
ggtgacattgaatttgaagcagctctccaatggaattctggatattctgaattaatttat
tcatatgcaaataatattcctacgcgtcaaggaggaacccaccttacaggattttctaca
gcactaactcgtgtacttaatgcctatattaaagctcataatttagctaagaacgataag
ctctcgttgacgggagaagatattcgtgaaggactcactgctgtagtttctgttaaagtt
cctaatcctcagtttgaagggcaaactaagcagaaactaggaaatagtgatgtaggttcc
gtatcacaacagatcactggagaagcgctaacaatcttctttgatgagaacccacaaatt
gcgaagatgatcgttgaaaaggttttcattgccgctcaggctagagaggcagcaaagaag
gctagggagctgacgttaaggaaaagtgctttggatagcgcacgactacctggaaagctt
attgactgtttggaaaaagatcctgcaaaatgtgaaatgtacattgtggagggggattcc
gctggaggatctgctaagcaaggtagagaccgtcgttttcaggctattttacctatccga
ggtaagatcttaaacgttgagaaagcacgtttacaaaagatcttccaaaaccaagaaata
ggaaccatcattgcagctttaggttgcggtattggatcggataattttaatttaggtaag
ctacgctatcgacgtatcattatcatgacagacgcggatgttgatggctctcatattcgt
actctgctattaacgttcttctaccgccatatgacagcattaattgaaaatgaatgtgtc
tatatagctcagcctcctttatacaaagtaagcaagaaaaaagatttccgttacattctt
tcagaaaaggagatggatgattatctattaactttaggagtttgtgacagtaaactggtg
tttaaaaacggagatcgtgagatcagtggagaagctttggacagctttgtcaagcttatc
ttgaacatagaaaactttatcgttgctttagagaaaaaagctgttcctttttctgaattt
ttagaaatgcgcaaggaaaccttaggctatcctttatattatagccctccgcaaagcggg
aagcaaggtggacgctatttctattcttccgaggaaaaagaagaagagatggcatctaga
gaagatgcggattctatgaaggttattgaattatataaaacgtcgatctttgcagaaatt
caagaggaattgcgagactatggtttagatattcgccattatctcaatcccaaagattct
gaaatggtgataaccaatgaagattcaaaaacgttaccttatacttgttatactttaaaa
gaagttatcgatcatctcaaagcccttggaagaaaaggtatagaaattcagcgttataaa
ggtcttggagaaatgaatgctgatcagctttgggatacaactatgaatcccgaacagaga
actttagttcgtgtgtcattgaaagatgctgttgaggcagatcatatcttcaccatgctt
atgggcgaagaagttcctccaagaagagaatttattgagaatcacgctctatcagttaag
atgaataatttggatatttag
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