Chlamydophila parapsittaci: FI836_02425
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Entry
FI836_02425 CDS
T09727
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cpaa
Chlamydophila parapsittaci
Pathway
cpaa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FI836_02425 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpaa03400
]
FI836_02425 (uvrB)
DNA repair and recombination proteins [BR:
cpaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FI836_02425 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FI836_02425 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_22
AAA_30
AAA_16
AAA_19
SWI2_SNF2
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QDE37160
UniProt:
A0ABX5VYT2
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All DBs
Position
562331..564301
Genome browser
AA seq
656 aa
AA seq
DB search
MTFELRAAFSPCGDQPEAIAKLTQGVRNHTPSQVLLGTTGSGKTFTIANVVANVNRPTLV
LAHNKTLAAQLYQEFKEFFPNNAVEYFISYYDYYQPEAYIARNDTYIEKSLLINSEIDKL
RLSATRSILERRDTLIVSSVSCIYGIGSPENYTSMALELKVGREYPRAILASQLVKMNYQ
ASSVAQRSTFRERGSVIDIFPAYESDLAIRLEFSNDTLSSIEYSDPLTMIPMESVTSIIL
YPGSHYVTPEAVREQAIRSIREELEERLAFFQDRPIEQDRLFHRTTHDIEMIKETGFCKG
IENYSRHFTKSPPGAPPACLLDYFPDDFLLVIDESHQTLPQIRAMYRGDRSRKESLVEYG
FRLPSAYDNRPLTYEEARKYFHNVIYVSATPGETELNESQGHIVEQIIRPTGIPDPIPEI
RPATGQVDDLLEEIRKHLSKSQAKILVISITKKLAEDIAAFLSELDIAAAYLHSGIETAE
RTRILSDLRLGNIDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRSTSSLIQFCGRAAR
NVDGKVIFYADHKTLSIEQTLKETERRRQIQLEYNKANKITPKPIIKAIFANPIPQGGKK
EVQDTPQQPLSTQELEKLIKKYENLMQQAANAFRFDEAAKYRDKMKAAKEQLLYLS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgacctttgaattacgagctgctttttcgccttgtggagatcagcccgaagctattgct
aagcttactcaaggcgtacgtaatcacactccatctcaggtgttgttaggtactacagga
tcaggaaaaacatttaccattgctaatgtggttgctaatgtcaatcgccctacactagta
ttagcacataataaaacattagctgcacagttgtatcaagaattcaaagaattcttccct
aataatgctgttgaatattttatctcctactacgattactaccagcccgaagcatatatt
gctcgtaatgatacctacatagaaaaaagtctcttaatcaacagtgaaatcgataaactg
cgtttatccgcaacgcgatctattctagagcgcagagatactttaattgtttcttctgta
tcgtgtatttacggtattggctctcccgaaaactacacttccatggcattagaactcaaa
gtaggaagggaatatccaagagcaatacttgcctctcagcttgtaaaaatgaattatcaa
gcttcctcagtagcgcaacgctcaacttttcgcgaacgcggtagtgtgatcgatattttc
cctgcttatgagagcgatctcgcaattcgtttagaattttccaatgacacattatcttct
atagaatacagcgatcctctcactatgattcccatggaatcggtaacctcaattatttta
tatccgggatcacactatgtcacacctgaagctgttcgtgaacaagcaatacgctctata
cgcgaagagctagaagaacgtttagcattcttccaagatcgtcctatagaacaagatcgc
ttatttcatagaactacgcatgacatcgaaatgatcaaagaaaccggattttgtaaagga
atagaaaactattctcgccactttacaaaaagtcctccaggagctcctcccgcctgccta
ttagattatttccccgatgactttttactagttattgatgaatcacaccaaacactacct
cagatacgcgctatgtatcgcggggaccgttctaggaaagaatctttagtcgaatacggt
tttcgtcttccctctgcttatgacaaccgtcctctgacctatgaagaagctaggaaatat
ttccataatgttatttatgtatctgcaactcctggagagacagaactcaacgaaagtcaa
ggtcatattgttgaacaaattatccgccctacaggaattcctgatcctattccagaaatc
cgtccggcaacaggacaagtagacgatctcctagaagaaattcgtaaacacttatctaaa
tctcaggcaaagattctagtcatctccatcaccaaaaagcttgccgaagatattgcagct
ttcctttcagaattagatatcgctgctgcctatttgcattctggaatagaaacagcagag
cgcacccgtatcctctctgacttgcgtttagggaatattgacgtgctcataggagtaaac
ttactccgtgaaggattagatcttcctgaagtttctctagtcgctattctcgatgccgat
aaagaaggttttctacgtagcacttcgtccttaatacagttttgtggaagagcagcaagg
aatgtggacggaaaagtcattttttatgctgaccacaaaactctctctatagaacaaacc
ttaaaagaaacagaacgtcgtcggcaaatacagttggaatacaataaagcaaataaaatt
acaccaaaacccattatcaaagcgatctttgccaatcctattccgcaaggagggaaaaag
gaagttcaagatacccctcaacaacctttatctacacaagaattagaaaagctcataaaa
aaatacgaaaatctcatgcagcaagctgccaacgcattcagatttgatgaagctgctaaa
tatcgtgataaaatgaaagctgctaaagaacaacttctttatctctcatag
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