Chlamydophila parapsittaci: FI836_03085
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Entry
FI836_03085 CDS
T09727
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cpaa
Chlamydophila parapsittaci
Pathway
cpaa03030
DNA replication
cpaa03430
Mismatch repair
cpaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FI836_03085 (dnaE)
03430 Mismatch repair
FI836_03085 (dnaE)
03440 Homologous recombination
FI836_03085 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpaa03032
]
FI836_03085 (dnaE)
03400 DNA repair and recombination proteins [BR:
cpaa03400
]
FI836_03085 (dnaE)
Enzymes [BR:
cpaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FI836_03085 (dnaE)
DNA replication proteins [BR:
cpaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FI836_03085 (dnaE)
DNA repair and recombination proteins [BR:
cpaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FI836_03085 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
HHH_3
T2SSK
DUF655
Motif
Other DBs
NCBI-ProteinID:
QDE37279
UniProt:
A0ABX5W047
LinkDB
All DBs
Position
complement(709096..712824)
Genome browser
AA seq
1242 aa
AA seq
DB search
MTWIPLHCHSQYSILDATSSIKSFVAKAKEYQIPSLALTDHGNLYGAIEFYKECQQNDIK
PIIGCEIYVAPSSRFDKKKEKKSRVANHLILLCKNELGYRNLCLLSSLAFTEGFYYFPRI
DRDLLSQHAEGLICLSACLSGSVAQAALESEEALEKDLRWYQNLFGEDFYSEIQLHKMSE
EKIASLGEEWLKHEYYQFIDSQTKVNQAVLDASKRLGIRSVATNDIHYIHADDWLAHEIL
LNVQLGETIRIAKQNTYIPNPKRKTFRSREYYFKSPEEMAMLFADHPETITNTLEVADKC
NLELNLSSKHYPIYVPDFLKDKPNYTEEERYAASSAFLRELCEKGLSTKYTPEKLAHISK
KFPDRDPLELVKERLEMEMSIIIPKGMCDYLLIVWDIIYWAKDNGIPVGPGRGSGAGSVM
LFLLGITEIEPIRFDLFFERFINPERLSYPDIDIDICMAGRERVINYAIERHGKDNVAQI
ITFGTMKAKMAVKDVGRTLDVALSKVNHIAKHIPELNTTLAKALETDPHLNELYTNDAEA
AQVIDMAMRLEGSIRNTGVHAAGVIICGDRLTNHIPICISKDSTMITTQFSMKPVESVGM
LKVDFLGLKTLTSIHIAIRAIEKKTGKLLEMASLPLDDKTTFALLHQGKTMGIFQMESKG
MQELAKNLRPDSFEEIIAIGALYRPGPMDMIPSFINRKHGKEIIEYDHPLMESILKETYG
IMVYQEQVMQIAGSLASYSLGEGDVLRRAMGKKDIDQMLKERTRFCERACKNGIDADLAT
TIFDKMEKFASYGFNKSHAAAYGLITYTTAYLKANYPREWLAALLTSDSDDIEKVGKLIH
EAHSMDICILPPDINESGTDFVATDKSIRFAMGAIRGIGKGLVESIIEEREKHGPYQSIQ
DFIQRSDLKKVTKKHTENLIDAGCFDVFEPDRDVAQATLESLYDSISKEKKEAATGVMTF
FSLNTMNQKHPITLTPAADVVRRSKKEILKKEKELLGIYLTEHPMDAVKDILPRLSVVSP
GEFDNLPHGAVIRTIFIIDKVTTRISSKGQRKFALLRVSDGVDSYELPIWPEMYAEQQEL
LEEDRLIYAILSIDKRSESLRLSCRWMRDLSLINEDLIQECDDMFDKIKSQMQKMSYLNL
ETNKDANQRKTSTMSKSTDHKSQVPTVKLSLDLEQLRHSHLCTLKQIIRKYPGSRALSLV
FTKNNERVASISPDSDYFVAEDTSGLQKDLENSQLPVRFIAV
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
gtgacttggatacctcttcattgtcattctcaatactctattctagatgctacaagctct
attaagagctttgtagcaaaagcaaaagagtatcaaattccttccttagcgttaacagat
catgggaatctctacggagcgattgagttttacaaagagtgccaacaaaacgatattaag
cctattattggctgtgaaatctacgtcgctccttcatcacgttttgataaaaagaaagag
aaaaaaagccgcgttgccaatcacctcattctgttatgtaaaaacgaactaggctatcgt
aatctttgtctattatcttccttagcttttactgaagggttttattattttcctagaata
gacagggaccttcttagccaacatgctgaggggttaatttgtttatccgcgtgtctttct
ggttctgtagcacaagcggcattagaatcagaagaggctctagaaaaagatctccgctgg
tatcaaaatttattcggggaagatttttacagtgaaatccaactgcataaaatgtctgag
gagaaaatagcttctctgggtgaagaatggttgaaacatgagtattatcagtttattgat
tcccaaacaaaggtaaatcaagctgtattagatgcaagtaaacgtttaggcattcgatcg
gtagctacaaacgatattcactatattcatgctgatgattggttagctcatgagattctc
ctcaatgtccaactaggagaaaccataaggatagcaaagcagaatacctatatccccaac
cccaagagaaaaactttccgtagtagggaatattattttaaatcccctgaagaaatggca
atgttatttgccgatcatcctgaaacgattactaatactttagaagttgctgataagtgc
aacctagaattaaatctttcaagcaaacactaccctatttatgttcctgattttttaaaa
gataagccaaactatactgaagaagagcgttacgcagcttcttcagcttttcttcgagaa
ctttgtgaaaaaggcttgtccacaaaatacactccagaaaagcttgctcatatctcaaaa
aaattccctgatcgcgatcccttagaattagtcaaagaacgcttagaaatggaaatgtct
atcatcattcctaaagggatgtgtgactacctactgatcgtttgggacatcatctattgg
gcaaaagataatggtattcctgtaggtcctggtcgtggttctggagcaggctctgttatg
ttattcctattgggaatcacagaaatagaacctattcgttttgacttattctttgagaga
ttcattaacccagaaaggttatcctatcctgatatcgatatcgatatctgtatggcagga
cgtgaacgcgttattaactatgcaatagaacgtcatgggaaagataacgttgcccagatc
attacttttggaactatgaaagccaaaatggctgtaaaagatgtgggtagaactttagat
gttgccctttctaaggttaaccacattgccaagcatattccagagctgaatactacgtta
gcaaaagccttagaaacagaccctcacctaaacgaattgtataccaacgatgctgaagcg
gctcaagttatcgacatggcaatgcgtctagaaggatctatccgcaatacaggagtgcat
gctgctggagtgatcatctgtggagatcgcctaacgaatcacatacccatttgtatttct
aaagactctaccatgatcaccacacaattttccatgaagccggtggaaagtgtaggcatg
cttaaagtagacttcttaggattaaaaaccctaactagtatccacatagccattcgtgca
atcgaaaagaaaacgggaaagttattagagatggcatctctacccctagatgacaaaacg
acatttgctcttttgcatcaagggaagactatgggtatattccaaatggaatccaaagga
atgcaggaattagcaaaaaatctccgtcctgattcttttgaagaaatcatagcgataggt
gctttgtatcgtccaggtcctatggacatgattccctcattcatcaaccgaaagcacggg
aaagagatcatagaatatgatcaccccttgatggagagcattctcaaagaaacctatggg
attatggtttatcaagagcaagttatgcaaattgccggctctttagcaagctactccttg
ggagagggtgatgtcttacgtcgtgctatggggaaaaaagacatcgatcaaatgctcaaa
gagcgaacaagattttgtgaacgagcatgcaaaaatggtattgatgctgatctagcaacg
actatttttgataaaatggaaaagtttgcttcttatggatttaataaatctcatgcggct
gcttatgggttaatcacttatacaactgcatatctcaaagcgaactatcctagagaatgg
ttggcagctcttcttaccagtgattctgacgatattgaaaaggtagggaaactgatccat
gaagcgcatagcatggatatctgtatccttcctcctgatatcaatgaatccggaactgat
tttgttgctacagataagagcattcgttttgctatgggggccatccgaggtatagggaag
ggccttgtagaaagtattatagaagagagagagaaacacggtccttatcaaagtattcaa
gattttattcaacgctctgatttaaaaaaagttactaaaaaacatacagaaaacttaatt
gatgcgggatgttttgatgtttttgaaccagatagagacgtcgctcaagcaactttagaa
tccctatacgatagtatatctaaagaaaagaaagaggcagctactggtgtcatgaccttc
ttttctttaaatactatgaatcaaaaacatcctatcaccttaactcctgcagctgatgtt
gtccgtagatcaaaaaaagaaatacttaagaaggaaaaagaacttttagggatctacctt
actgagcaccccatggatgctgttaaagatattttacctcggctttcggtggtaagtcct
ggagaatttgacaatctccctcatggagcagtaattcggacaatatttattattgataag
gtaacgacacggatttcctcaaaaggccaaagaaaatttgctttattacgtgttagcgat
ggcgtagattcttatgaactgccgatatggccagaaatgtatgctgagcagcaagagctt
ctagaagaagatcgtttaatttacgctattttatctattgataaacgtagcgaatctcta
cgcttatcttgccgatggatgagagacctgtctcttattaatgaagatctcattcaagaa
tgcgacgatatgtttgataaaatcaaaagtcaaatgcagaaaatgtcgtatttaaattta
gaaactaataaagacgcgaatcagaggaaaacatcaaccatgtcaaagtctactgatcac
aagtctcaggtgcccacagttaagctatctttagatcttgagcaactacgccatagccac
ttatgtacgttaaaacaaatcattcgcaaatatcctggatctcgcgcactctctctagtt
tttaccaaaaataatgaacgtgtagcctctatctctccggactctgattattttgtcgct
gaagatactagtggtcttcaaaaagatttggaaaattcccaacttcctgttcgattcatt
gctgtttaa
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integrated database retrieval system
