KEGG   Chlamydophila parapsittaci: FI836_03285
Entry
FI836_03285       CDS       T09727                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
cpaa  Chlamydophila parapsittaci
Pathway
cpaa03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cpaa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    FI836_03285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpaa03021]
    FI836_03285
   03400 DNA repair and recombination proteins [BR:cpaa03400]
    FI836_03285
Enzymes [BR:cpaa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     FI836_03285
Transcription machinery [BR:cpaa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     FI836_03285
DNA repair and recombination proteins [BR:cpaa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      FI836_03285
SSDB
Motif
Pfam: RNA_pol_A_CTD RNA_pol_L RNA_pol_A_bac
Other DBs
NCBI-ProteinID: QDE37317
LinkDB
Position
739915..741045
AA seq 376 aa
MSDCSQNLLYDKFELPESVKMMAVEGSGGSVDKQASFIAEPLERGMGHTLGNALRRALLI
GLEAPAIISFSMTGVLHEYMAINGIIEDVTNIILNLKGALLKKYPFQDSENGRCTQLLKS
KVSIDASDLAACGGQKAVTLADLLQEGGFESVNPDHVIFTVTQPMQLDITLRVAFGRGYT
TSERIVLEDKGVNEIVLDAAFSPVVLVNYFVEDTRVGQDTDFDRLILHVETDGRVSPKEA
LAFSTQILTKHFSIFEKMDEKKIVFEEAISIEKENKDDILHKLVLGINEIELSVRSTNCL
SNANIETIGELVIMPEPRLLQFRNFGKKSLCEIKNKLKEMKLELGMDLSQFGVGLDNVKE
KMKWYADKIRSKNGKG
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgtcggattgttcacaaaatttactttacgataaatttgaattgccagagtcagtcaaa
atgatggctgtagaaggtagcgggggatcggttgataagcaggcgagttttatagcagag
cctttagaaagaggtatgggtcatactttaggtaatgctttgagaagagctttgctcata
ggcttggaagctcctgcaattatttctttctctatgactggtgtgcttcatgagtacatg
gcaattaacggaattatagaagatgtaacaaatatcatcttgaatttgaaaggagcttta
ttaaagaaatatcctttccaagacagtgaaaatggtcgttgtactcaattattaaagtct
aaagtttctatagacgcctctgatttggctgcctgtggtggtcaaaaggctgttacattg
gctgatttgttgcaagaaggtgggtttgaatccgttaaccccgatcacgtgattttcact
gtgacacagcctatgcaactagatattactttgagagttgcttttggcagaggttatact
acatctgaaagaattgttcttgaagataagggtgtaaatgaaattgttttagatgcagct
ttctcacccgtcgtcttggttaattactttgtagaagatactcgtgtaggtcaagataca
gatttcgatcgtttgattttgcatgtagaaacagatggtagagtatctcctaaagaagct
ttagccttttctacacaaattttaacaaaacatttctccatttttgaaaaaatggatgag
aagaagatagtctttgaagaagccatttctatcgaaaaagaaaacaaagacgatattctt
cataagttagttttaggtattaatgagatcgaactatctgtaagatccacaaattgtttg
tctaatgcaaacattgaaaccataggtgagttggttattatgccagaacctcgcttgcta
cagttcagaaactttggtaaaaagtctctttgtgagattaagaacaagttaaaagaaatg
aagttagaattgggaatggatcttagccagttcggcgttggtttagacaacgtaaaagaa
aaaatgaagtggtatgccgataagattcggtctaaaaacggtaagggataa

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