Chlamydophila parapsittaci: FI836_03385
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Entry
FI836_03385 CDS
T09727
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cpaa
Chlamydophila parapsittaci
Pathway
cpaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FI836_03385 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpaa03021
]
FI836_03385 (rho)
03019 Messenger RNA biogenesis [BR:
cpaa03019
]
FI836_03385 (rho)
Transcription machinery [BR:
cpaa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FI836_03385 (rho)
Messenger RNA biogenesis [BR:
cpaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FI836_03385 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA_22
OB_RNB
S1CSD-TOTE-2
AAA
Mor
DUF5855
NACHT
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QDE37334
UniProt:
A0ABX5VYI6
LinkDB
All DBs
Position
758325..759719
Genome browser
AA seq
464 aa
AA seq
DB search
MKEERSSEVLPKVKENRKHACPGLQEKSFAGECAVVADVVNENQPVTITKIAKLQRMGIE
ELNVLARQYGVKNIGSLTKSQVVFEIVKAKSERSDELLIGEGVLEVLPDGFGFLRSPTYN
YLPSAEDIYVSPAQIRRFDLKKGDTIIGTIRSPKEKEKYFALLKVDKINGSTPDKAKERV
LFENLTPLYPNERIVMEMGKEHLAERVLDLTAPIGKGQRGLIVAPPRSGKTVILQSIAHA
IAVNNPDIVLIVLLIDERPEEVTDMIRQVRGEVVASTFDEQPERHIQVAEMVIEKARRLV
EHGKDVVILLDSITRLARAYNTVQPHSGKILTGGVDASALHKPKRFFGAARNIEGGGSLT
ILATALIDTGSRMDEVIFEEFKGTGNMELVLDRRLSDRRTYPAIDLIKSGTRKEELLYHP
SELEKVYLFRQAIADLTAIDAMHLLLGRLKKTNSNAEFLLSLKE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagaacgttcttcagaagtcttgccaaaggtcaaagagaatagaaaacatgcg
tgtcctgggttgcaagagaagtcttttgcgggagaatgtgcagtagttgcggatgtagtg
aatgaaaatcaacctgtaactattacaaaaattgccaaattgcaaaggatgggaattgaa
gagcttaatgtattggctcgtcaatatggagtgaagaacatcgggtctctcactaaatct
caagtggtatttgagatcgttaaagcaaagtctgaacgttcagatgagcttttaatcggg
gaaggggttttggaagttcttcctgatgggtttggctttttaagatcacctacttataac
tatctcccttctgctgaagatatttatgtttccccagctcagattcgcagatttgattta
aagaagggagacacaattataggcaccatacgttctccaaaagagaaggaaaagtatttt
gccttattaaaggtagataagattaatggatctaccccagacaaagctaaggaacgagtt
ttattcgaaaacttgacccctctataccccaatgaaagaattgttatggaaatggggaag
gagcacctcgctgaacgggtgttagatcttacggcgcccatagggaaagggcaacgggga
cttattgtagctcctccacgttctggaaagacagtaattttacagagcatagcccacgct
attgcagtaaataatcctgatattgttctcattgttttgttaattgacgagcgcccagaa
gaagttaccgatatgattcgacaggtgcgtggtgaagttgttgcttctacgtttgatgag
cagcctgaaagacatattcaagttgcagaaatggttatagaaaaggctcgacgtctagtt
gaacacggaaaggatgtagtgattcttctcgattctattacacgtttagcgcgagcttac
aataccgtgcaaccacattctgggaagatcttaacaggaggcgtagacgcgagtgctcta
cataaacctaagagatttttcggagcagcaagaaatatcgaaggtggcggatcgttaacc
attttagctacagcgttgatagatactggttctagaatggatgaagtcattttcgaggag
ttcaaaggtacaggaaatatggaactggtactagatcgtcgcctttctgatcgaagaact
taccctgctattgatcttattaagagtggtacaagaaaagaagaattactctatcaccct
agtgaattagaaaaagtttaccttttccgacaggcaattgctgatcttactgctattgac
gctatgcatctgttgttaggtagattaaaaaagacaaatagtaacgcagagtttttactt
tctctaaaagaatag
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