Companilactobacillus pabuli: G6534_02250
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Entry
G6534_02250 CDS
T07234
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cpab
Companilactobacillus pabuli
Pathway
cpab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G6534_02250 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpab03019
]
G6534_02250 (rny)
Messenger RNA biogenesis [BR:
cpab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
G6534_02250 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
ATP-synt_B
KH_KhpA-B
KH-I_KHDC4-BBP
V-ATPase_G
YycC
KH_2
Motif
Other DBs
NCBI-ProteinID:
QMT83543
UniProt:
A0A7L7KUP5
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Position
477645..479210
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AA seq
521 aa
AA seq
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MYPAIITFSFALVTLIVGVLFGYALCKDAYEKKLSQAKQTAEDIVSDANKAAKSLKKEKL
LEAKDEIHQYREKQEDELKERRKDIQKQENRVLERQDILDKKDQTLEKREDNIEHNENNL
AVRQQKLDEKAKQLTDTLEKQQAELVRVSNLTREQARKIILDKLNKELVHERAKMIKESD
EQAKQTAEKDAKALIVAAIQRSAADTVSESTVTTVTLPNEDMKGRIIGREGRNIRTIEAL
TGVDLIIDDTPEAVALSAYDPVRREIARMALEKLIEDGRIHPARIEEMVDKARKEMDDHI
REVGEQTVYSLGISSINPDLIKIIGRMEYRTSYGQNVLNHSIEVAKLSAVMASELGEDVM
LAKRAGLLHDIGKAIDREVDGSHVEIGVDIATKYKEPEVVINTIASHHGDVEPTSLIATI
VAAADAISASRPGARSESMENYIHRLEKLEEISDKHEGVDHSYAIQAGHEIRVMVKPEQI
SDDQAAILARDIKGEIEDNLEYPGHIKVTVVREVRKVELAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtatcctgctatcataaccttctctttcgctctagtaacattaattgtgggtgtcctt
ttcggatatgctctctgtaaagatgcctacgagaaaaaactttcacaagctaaacagact
gctgaagatattgtttcggacgctaacaaggctgctaagtccttgaaaaaggaaaaatta
cttgaagccaaggatgaaattcatcagtatcgtgagaagcaagaagatgaattgaaagaa
cgtcgtaaagatattcagaaacaagaaaatcgtgttctcgaaagacaagacattttggat
aaaaaagaccaaacgcttgaaaaacgtgaggacaatatcgagcacaacgagaataatctt
gcagtgcgccaacaaaaacttgatgaaaaagctaaacaattgactgatactcttgaaaaa
cagcaagcggagctggtaagagtaagtaacttaactcgcgaacaagcgagaaaaatcatt
cttgataaattaaataaagaattggttcatgaacgtgccaaaatgattaaagaaagtgac
gaacaagctaagcaaacagcagaaaaggatgctaaggctttgatcgttgcagctatacaa
agaagtgcagctgatactgtttcagaatcgaccgttacaaccgttacattgcctaatgaa
gacatgaaggggagaattattggtcgtgagggtagaaatatccggactatcgaagcgtta
acgggggttgacttgataatcgacgatactccagaagcagttgcattaagtgcttatgat
ccagtcagacgagaaattgctcgaatggctttggagaaattgattgaagatggaagaatt
catccagctcgtatcgaagaaatggtcgataaggctagaaaagaaatggatgatcatatt
cgtgaagttggtgaacaaactgtttatagtttgggtatcagctcgattaatcctgatttg
attaagattattggacgtatggaatatcgtacgagttacggtcaaaatgttttgaatcac
tcaattgaagtcgctaaattatccgctgtaatggcttcagagttgggtgaagatgttatg
ttagcaaaacgagcaggtttattacacgatatcggtaaagctatcgatcgtgaagttgac
ggatcccacgtagaaataggtgtggatatcgcaactaagtataaagaaccagaagtagtc
attaatacgattgcttcacatcacggggatgttgaaccaacatcattgattgcaacaatt
gttgcagcggctgatgcaatttctgcatcgcgtcctggtgctagatcagaatcgatggag
aattacattcaccgtcttgagaaattggaagaaatttccgataaacatgaaggtgttgat
catagttatgctattcaagctggtcatgaaattcgtgtcatggtcaagcctgaacaaatt
tctgacgatcaagctgcaattttggctcgagatattaaaggtgaaattgaagataacctt
gaatatcctggacatatcaaagttacagttgttcgtgaagtcagaaaagttgaattagca
aaataa
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