KEGG   Companilactobacillus pabuli: G6534_02250
Entry
G6534_02250       CDS       T07234                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
cpab  Companilactobacillus pabuli
Pathway
cpab03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cpab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    G6534_02250 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpab03019]
    G6534_02250 (rny)
Messenger RNA biogenesis [BR:cpab03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     G6534_02250 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD ATP-synt_B KH_KhpA-B KH-I_KHDC4-BBP V-ATPase_G YycC KH_2
Other DBs
NCBI-ProteinID: QMT83543
UniProt: A0A7L7KUP5
LinkDB
Position
477645..479210
AA seq 521 aa
MYPAIITFSFALVTLIVGVLFGYALCKDAYEKKLSQAKQTAEDIVSDANKAAKSLKKEKL
LEAKDEIHQYREKQEDELKERRKDIQKQENRVLERQDILDKKDQTLEKREDNIEHNENNL
AVRQQKLDEKAKQLTDTLEKQQAELVRVSNLTREQARKIILDKLNKELVHERAKMIKESD
EQAKQTAEKDAKALIVAAIQRSAADTVSESTVTTVTLPNEDMKGRIIGREGRNIRTIEAL
TGVDLIIDDTPEAVALSAYDPVRREIARMALEKLIEDGRIHPARIEEMVDKARKEMDDHI
REVGEQTVYSLGISSINPDLIKIIGRMEYRTSYGQNVLNHSIEVAKLSAVMASELGEDVM
LAKRAGLLHDIGKAIDREVDGSHVEIGVDIATKYKEPEVVINTIASHHGDVEPTSLIATI
VAAADAISASRPGARSESMENYIHRLEKLEEISDKHEGVDHSYAIQAGHEIRVMVKPEQI
SDDQAAILARDIKGEIEDNLEYPGHIKVTVVREVRKVELAK
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgtatcctgctatcataaccttctctttcgctctagtaacattaattgtgggtgtcctt
ttcggatatgctctctgtaaagatgcctacgagaaaaaactttcacaagctaaacagact
gctgaagatattgtttcggacgctaacaaggctgctaagtccttgaaaaaggaaaaatta
cttgaagccaaggatgaaattcatcagtatcgtgagaagcaagaagatgaattgaaagaa
cgtcgtaaagatattcagaaacaagaaaatcgtgttctcgaaagacaagacattttggat
aaaaaagaccaaacgcttgaaaaacgtgaggacaatatcgagcacaacgagaataatctt
gcagtgcgccaacaaaaacttgatgaaaaagctaaacaattgactgatactcttgaaaaa
cagcaagcggagctggtaagagtaagtaacttaactcgcgaacaagcgagaaaaatcatt
cttgataaattaaataaagaattggttcatgaacgtgccaaaatgattaaagaaagtgac
gaacaagctaagcaaacagcagaaaaggatgctaaggctttgatcgttgcagctatacaa
agaagtgcagctgatactgtttcagaatcgaccgttacaaccgttacattgcctaatgaa
gacatgaaggggagaattattggtcgtgagggtagaaatatccggactatcgaagcgtta
acgggggttgacttgataatcgacgatactccagaagcagttgcattaagtgcttatgat
ccagtcagacgagaaattgctcgaatggctttggagaaattgattgaagatggaagaatt
catccagctcgtatcgaagaaatggtcgataaggctagaaaagaaatggatgatcatatt
cgtgaagttggtgaacaaactgtttatagtttgggtatcagctcgattaatcctgatttg
attaagattattggacgtatggaatatcgtacgagttacggtcaaaatgttttgaatcac
tcaattgaagtcgctaaattatccgctgtaatggcttcagagttgggtgaagatgttatg
ttagcaaaacgagcaggtttattacacgatatcggtaaagctatcgatcgtgaagttgac
ggatcccacgtagaaataggtgtggatatcgcaactaagtataaagaaccagaagtagtc
attaatacgattgcttcacatcacggggatgttgaaccaacatcattgattgcaacaatt
gttgcagcggctgatgcaatttctgcatcgcgtcctggtgctagatcagaatcgatggag
aattacattcaccgtcttgagaaattggaagaaatttccgataaacatgaaggtgttgat
catagttatgctattcaagctggtcatgaaattcgtgtcatggtcaagcctgaacaaatt
tctgacgatcaagctgcaattttggctcgagatattaaaggtgaaattgaagataacctt
gaatatcctggacatatcaaagttacagttgttcgtgaagtcagaaaagttgaattagca
aaataa

DBGET integrated database retrieval system