Companilactobacillus pabuli: G6534_02385
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Entry
G6534_02385 CDS
T07234
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
cpab
Companilactobacillus pabuli
Pathway
cpab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G6534_02385 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpab03400
]
G6534_02385 (uvrA)
DNA repair and recombination proteins [BR:
cpab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G6534_02385 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G6534_02385 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
AAA_29
nSTAND1
AAA_21
AAA_22
nSTAND3
AAA_23
AAA_33
AAA_14
AAA_25
cobW
DnaJ_CXXCXGXG
Viral_helicase1
SLFN-g3_helicase
NACHT
RNA_helicase
T2SSE
AAA_15
MMR_HSR1
Septin
DUF87
HMGL-like
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
QMT83566
UniProt:
A0A7L7KW64
LinkDB
All DBs
Position
506376..509225
Genome browser
AA seq
949 aa
AA seq
DB search
MLNDKIVIHGARAHNLKNVDVTIPRDKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLS
SYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLWARVGTP
ICPNDGTKITSQSAQQMVDAILKLGDKTKLQILSPVVRAKRGQHKKALNQIKKQGYVRVR
VDGETRDIAEDIELDKNKKHSIDVVVDRIVINDHIKSRLFDSVEAALRLSDGYMNVDVIG
SDMMVFSEKNACPLCGFTVGELEPRLFSFNAPFGACDNCDGLGVKLEVDLDLVIPDQSKT
LNDGAIVPWNPISSQYYPEMLAQACKEFKIDMDTPFEDLPQKDQNTILYGSDGKNFHFHY
ENDFGGVRDVDVPFEGVIPNINRRYHETNSDFTREVMRKYMTELTCPVCHGKRLNRQALA
VKIEGKDIAEASDMSIKDELPFFKSVKFGEQNTVIAKPILKEVKDRLSFLINVGLEYLTL
SRSAGTLSGGEAQRIRLATQIGSNLSGVMYILDEPSIGLHQRDNDRLISSLKKMRDLGNT
LIVVEHDEDTMRAADYLIDVGPGAGENGGQIVAAGTPEEVEKNPKSLTGQYLAGKKFIPV
PLKRRAGNGEFVEVFGAAENNLKSLNVKFPLGKFTVVTGVSGSGKSTLVNMILKRALAQK
MNHNSEKPGKYKKITGYENLDKIIAIDQSPIGRTPRSNPATYTGVFDDIRGLFAQTNEAK
LRGYKKGRFSFNIKGGRCENCRGDGIIKIEMNFLPDVYVPCEVCHGTRYNSETLEVTYKG
KNIAQILDMKVSEALDFFSNIPKIKRKLQTIEDVGLGYVSLGQSATQLSGGEAQRMKLAS
ELYKKSNGKNFYILDEPTTGLHTDDIKRLLGVLQRLVDEGNTVLVIEHNLDVVKSADWLI
DLGPDGGEGGGKIVAAGTPEDITKVKDSYTGQYLKPILERDTKRTKDAQ
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatgataaaattgtaattcatggtgcacgtgcacacaatttgaaaaatgttgac
gtgacgattcctcgtgataaattagtcgttgtgactggtttatcaggttcaggaaagagt
tctttagcttttgacactttgtatgctgaaggtcaaagacgttacgttgaaagtctttca
tcgtatgctcgacaatttttaggtcaaatggataaaccggatgttgattcaattgatgga
ttgagtccagctatttcaattgaccaaaaaactacttccaaaaaccctcgttcaactgtt
ggtaccgttacagaaattaacgattaccttcgtttgttgtgggctcgtgtaggaacacca
atttgtcctaatgatgggaccaaaattactagtcaatcagcccaacagatggttgatgct
attttaaaattaggtgataaaactaaacttcagattttgtcaccagttgtgcgtgcaaag
cgtggacaacacaaaaaggccttgaatcaaattaagaaacaaggttacgttagagttcga
gttgatggcgaaactcgcgatatcgcagaagatatcgaattggataagaacaagaagcat
agtatcgatgttgttgttgatcgtatcgtaatcaacgaccacattaaatcacgtttgttc
gattcagttgaagcagctttgagactttctgatggttacatgaacgttgatgtaattggt
tctgacatgatggtgttctctgagaagaatgcttgtccattgtgtggatttactgttggt
gagctagaacctcgtttattctctttcaatgcaccttttggcgcctgtgataattgtgat
ggactaggagttaaattagaggtcgatttggacttagttattcctgatcaaagcaagact
ttgaatgatggagctattgttccttggaatccaattagttcacaatattatccagaaatg
ttagctcaagcatgtaaagaattcaaaattgatatggatacaccttttgaagacttgcca
caaaaggatcaaaataccattttgtacggttccgatggcaagaacttccacttccattat
gagaatgattttggtggcgttcgtgatgtcgatgtgccatttgagggcgttattcctaat
atcaatcgtcgttatcatgaaactaacagtgactttactcgtgaagttatgcgtaagtat
atgactgaattaacttgtcctgtttgtcatggtaagagattgaatcgtcaagcattggcg
gtcaaaattgaaggtaaagatatcgctgaagcttcagatatgtcaatcaaagatgaactt
ccatttttcaaatcagtgaaatttggtgaacaaaatactgttattgctaaaccaattttg
aaggaagttaaagatcgtcttagtttcttaattaatgttggtttggagtacttaacactt
tctcgttcagctggaacattatccggtggtgaagcacaaagaattcgtttggcaacacaa
attggttctaatttatccggcgttatgtatattttggatgaaccttcaattggtttgcat
caacgtgataacgaccgtttgatcagttcattgaagaaaatgcgtgaccttggcaacact
ttgatagtcgtggaacacgatgaagataccatgcgggcagcagattacttgattgacgtc
ggtccaggtgctggtgaaaatggtggtcaaatcgtagctgctggtacaccagaagaagtt
gagaaaaatcctaaatctctaacaggtcaatatttggctggtaagaagtttataccggta
cctttgaaacgtcgtgctggtaatggtgaattcgttgaagtattcggtgctgctgagaat
aatttgaaaagcttaaacgttaaattcccactaggcaaatttaccgttgtgactggggtt
tctggttccggtaaatctactttagttaatatgattttgaaacgtgctttggcacaaaag
atgaatcataattctgaaaaacctggtaaatataagaaaatcactggttatgagaattta
gataagataattgcgattgatcaaagtccaattggtcgaacaccaagaagtaatccagct
acttatacgggtgtatttgatgatatccgtggtttgtttgctcaaactaatgaagctaag
ttacgtggatacaaaaagggcagattctctttcaatattaaaggtggtcgctgcgagaat
tgccgtggtgacggaattatcaagattgaaatgaatttcttgcctgatgtttatgtacct
tgtgaagtttgtcatggtactcgttacaattcagaaactctagaagttacttataagggg
aagaacatcgcccaaattttggatatgaaagtatcagaagctttggacttctttagtaat
atccctaagatcaaacgtaagctccaaacaattgaagatgttggtttaggctatgtttca
ttaggtcaatcagccactcaattgtctggtggtgaagctcaaagaatgaagttggcttca
gagctttacaagaaatctaacggtaagaatttctatatcttagatgagccaacaactggt
ttgcatactgacgatatcaagcgtttgttaggcgttttacaacgtttagtagatgaaggt
aacactgttttggttatcgaacataatttggatgttgttaagtcagctgactggttgatt
gatcttggccctgatggtggtgaaggtggcggaaaaatcgttgctgctggaacgccggag
gatattactaaggtcaaagatagttatactggccaatatttgaaaccaattttggaacgt
gatactaaacgtactaaagatgcacaataa
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