Companilactobacillus pabuli: G6534_03030
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Entry
G6534_03030 CDS
T07234
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpab
Companilactobacillus pabuli
Pathway
cpab03420
Nucleotide excision repair
cpab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G6534_03030
03430 Mismatch repair
G6534_03030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpab03400
]
G6534_03030
Enzymes [BR:
cpab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G6534_03030
DNA repair and recombination proteins [BR:
cpab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G6534_03030
MMR (mismatch excision repair)
Other MMR factors
G6534_03030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QMT83655
UniProt:
A0A7L7KVE8
LinkDB
All DBs
Position
621691..623949
Genome browser
AA seq
752 aa
AA seq
DB search
MKFSDEQIAILENDFTKPLLVNACAGAGKTTIFILMALIAIAKGNADPDEILGITFSHKS
RVDMGDRYNKFVNELSETGLELLDGRPNFTTFHALFYQLLRQNQEYQQARVLTSYRLFTR
ELSDTIKHPSTVITKSEMLEQMFNLNEYLINQDLTTDGILPTNKTVDESIKEMSQFSRQT
HDDNFYYDYVDVMTKYQELKRQNGYIDFNDMKMLLLKSMEDPNHLQFYQRIMSRYKIAVI
DEFQDIDNLQWKIISKLLSPETMQHLIVIGDDDQSIYAFRGSNPKFILNYKKLLPNAQKK
NLSTNYRTGEKILQKVIPLIKENHVRLNKDLLSGRTGVGDFVLYSSKKSGFSRKSKMLKH
LVKQINDPDIDNDDIAILVRYNSSRMLLADWLANKKIYADINNASAILQNNLIYRIITEL
MKALWKDEYKYFSEQSNRIGFSKYKNHTQKVEARADDKFRKLSKYLLAAESYNAEFNTPL
KRTDERVQIYFNSIKRFKQRMEQADNKESQEKISKALIKDLLQAAIKLTDKYFDYMIQKK
FMAKSEVNEIKNYLEEELETYHSIDDFFFDEEQKKAILSSQVERNKQEHHIQFLSLHQAK
GLEFKYVYLYGLTNKEVEKPGLSINEWFPPDMTFEQFTKKWILIYNKSYEYLGTALGATR
ITDYQDFWKNNAFNPINLKATLDKKKETTMFHNFYQEVKNYSEFIEEERRLLYVGVTRAQ
EELCMRIAPDSNPLLFELNLPKKKKKVNGDKK
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctccgatgaacaaattgctattttggaaaatgattttaccaagccactacta
gttaatgcttgtgctggagctggtaaaacaacgatttttatcttgatggctttgattgcc
attgctaaaggtaatgccgacccagatgaaattttaggaattactttttctcataaatca
cgagttgatatgggtgatagatacaataaatttgtgaatgaattgagtgaaacgggatta
gaattattagacggtcgtcctaatttcacgacttttcatgctttgttttatcaattatta
cgtcaaaatcaagagtatcaacaggcacgggttttaacgagttatcgtttattcactcga
gagttgtctgatacgatcaaacaccccagtacagtgattactaagtcagaaatgctagaa
caaatgtttaatctcaatgaatatttgatcaatcaggatttgactactgacggaatttta
ccaactaataagacggtcgatgaatcaatcaaggaaatgtcacaattttcacgtcaaact
cacgatgacaatttttattatgattacgtcgatgtaatgacaaaatatcaagaattaaaa
cgtcaaaatggctatattgattttaatgatatgaagatgttgctgttgaaaagtatggaa
gaccccaatcatttgcagttttatcaacgtatcatgtctcgttataaaattgcggttatt
gatgagttccaagatatcgacaacttgcagtggaaaattatttccaaattacttagccca
gaaacgatgcaacatttaatcgttattggggatgatgaccaaagtatttatgcttttcgt
ggcagtaatccgaagtttattttgaactacaaaaaactcttgcctaatgctcaaaagaaa
aacctttcgactaattatcgaactggcgaaaaaattcttcaaaaagttattcccttgatt
aaagaaaatcacgttcgtttgaataaagatttgctttcaggaagaactggtgttggtgac
tttgtgctctatagtagcaagaaatctggtttcagtcgcaaatctaagatgctcaaacat
ttggtcaaacaaatcaatgaccctgatattgataatgacgatattgccattttagttcgc
tataattcatcacgaatgttgctcgccgattggttggctaataaaaaaatctatgctgat
attaataatgctagtgctattttgcagaataatttaatttatagaattattactgaattg
atgaaggctctctggaaagatgagtataagtatttttctgaacaatcgaatcggattggc
ttcagtaaatataagaatcatacgcagaaagttgaagctcgagctgatgataaatttcgt
aagttaagtaaatatttattggcagcggaaagttacaatgctgaattcaatactcccttg
aaaagaaccgatgaacgagttcagatttatttcaacagcatcaagcgtttcaaacaaagg
atggaacaagctgataacaaagagagccaagaaaaaatttcgaaagctttgatcaaagat
ttgttacaagcagctatcaaattaacagataaatattttgactatatgattcaaaagaag
tttatggctaagtctgaagtcaatgaaattaaaaattacttggaagaagaattagaaact
tatcacagcattgatgatttctttttcgatgaagagcaaaaaaaagcaattttatcgagt
caggtggaaagaaataaacaggagcatcacattcaattcttgtcattgcatcaagctaag
ggattagagttcaagtacgtttatttgtatggtttgacgaataaggaagttgaaaaacca
ggtttgtcgatcaacgaatggttcccaccagatatgacttttgagcaatttactaaaaag
tggattctgatctacaacaagagttatgaatacttgggcactgctttgggagccacgagg
attactgattatcaagatttttggaagaataatgcttttaatccgattaatttaaaagca
accttagataagaaaaaagaaacgacgatgtttcataatttttatcaggaagttaaaaac
tactcagaatttattgaagaagaaagacgattattgtatgttggagttactcgagcacaa
gaagaattgtgcatgaggattgcaccggattctaatccattgttgtttgaattgaatttg
ccaaagaagaagaaaaaagtgaatggggataaaaaatga
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