Companilactobacillus pabuli: G6534_04015
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Entry
G6534_04015 CDS
T07234
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cpab
Companilactobacillus pabuli
Pathway
cpab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G6534_04015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpab03400
]
G6534_04015
Enzymes [BR:
cpab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
G6534_04015
DNA repair and recombination proteins [BR:
cpab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G6534_04015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
PIF1
UvrD-helicase
AAA_22
nSTAND3
AAA_12
AAA_23
UvrD_C
Herpes_Helicase
SLFN-g3_helicase
AAA_29
AAA_28
AAA
T2SSE
AAA_16
RsgA_GTPase
NTPase_1
AAA_17
NPHP3_N
DUF4926
DUF815
MMR_HSR1
TsaE
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QMT83835
UniProt:
A0A7L7KVX4
LinkDB
All DBs
Position
824317..826698
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AA seq
793 aa
AA seq
DB search
MTDSNETPYFLGTVKAIFFENPENLYKIFTIKIKKTNTDWDAKDIVVTGSFGEISEEEEY
RFEGRIVDHPKYGKQFQATSYQRSRPNGRKELISFFSSEEFPGIGKKKAEKIVDELGNDA
IDKILKDPHALDFLKLGTEKTQQIIEQISSNHQTEQALYQLNNYGFGPTLSARIYQKYGV
QTLEKIQDDPYQLVLDVKGVGFKRADELARRLGITGDDPRRIKGALIQMTSSMINETGDT
YVDGQDLIRRVMGVLRNNSTDDLAQKLVAGLRDLVKNGVLLVEDGNVYQKDLADSEWSIA
QSLKMITDTFKGVSWTEHAMKKELKKIEKRFKVKYDDSQEKAIRQFLTHPIFLLTGGPGT
GKTTIINAIVAAYAELNDMPLDPASDDYAIALAAPTGRAAKHMGEATGLPAMTIHRLLGL
TGTEDDEYAEPSLDCKLLIIDEMSMVDTKLFKVLISAVQPGTQIVLVGDRDQLPSVGPGQ
IFADLINSDAFPTTILKNIHRQDEDSTIIQLAHDINEGIIVDGIFQNRADRSFINCDSRN
VPSVLSQIIAKSSERGFDIADVQVLAPMYRGQAGIDNLNYVIQNVVNPMKPKRKEVSMGN
VKYRINDKVVYLVNTPEDNVFNGEIGKIVGIILAKENTDHVDQLVIDFDGNEVTLDRKDW
TNISLAYCTSIHKSQGSEFEMVILPLVNEESRMLRRNLLYTAVTRAKRLLIMVGDRSAFE
RSIKDQSSERQTTLKQRIFTTFKIKVPEAPSEEETQEQAPIDYRLTLDMIMNNAIDPMIG
MEHITPQDFLEKK
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgacggacagtaatgaaacaccatatttcttaggcactgtcaaagctatcttttttgag
aatccggaaaacctttataaaatttttacaattaaaataaagaaaacaaatactgattgg
gatgcgaaagatattgttgtaactggtagctttggtgaaatatcagaagaagaggaatat
cgtttcgaaggccgcatcgttgaccatcccaaatatggcaagcaatttcaagctacttca
taccaaagaagtcgtcctaatggtcgtaaagaattaatcagcttcttttctagtgaagag
tttcctggtattggtaagaaaaaagccgaaaagattgttgatgaattaggtaacgatgct
atcgataaaattcttaaagaccctcatgcacttgatttcttgaaattgggaactgaaaag
actcaacagattattgaacaaatctctagcaatcatcagacagagcaagccttgtatcaa
ttgaataactatggctttggacctactttgagtgcacggatctatcaaaagtatggagtt
caaacactggaaaagattcaagacgatccttatcaattagttttagatgttaaaggtgtc
ggtttcaagcgagctgatgaattggctagaagattagggattactggtgatgaccctcga
cggatcaaaggtgccttaattcagatgacgagctcaatgatcaatgaaactggcgatact
tacgttgatgggcaagatttgattagaagagttatgggagttttgagaaataattcaact
gatgacttggcgcaaaagttagtagctggtttacgagatttagttaaaaacggagttttg
ctagttgaagatggcaatgtttatcaaaaagatctggcagattctgaatggtcgatagca
cagtctttgaagatgatcactgatacttttaagggtgtctcatggactgaacacgccatg
aaaaaagaacttaaaaaaattgaaaagcgttttaaagttaaatatgatgactcacaagaa
aaagctattcgtcaatttttgacgcatccaatttttctattaactggtggtccgggaact
ggtaaaacgactatcatcaatgcaattgtagcagcatatgctgaattaaatgatatgccc
cttgatccagcttcagatgattatgcgattgctttagctgctccaacgggaagagctgct
aaacacatgggagaggcaactggtctgccagctatgacaattcatcgcttgttaggtcta
acgggtactgaagatgacgaatatgctgaaccaagccttgattgcaaattgttgattatt
gatgagatgtcgatggtcgatacaaaattattcaaagttttgatatcagctgtgcagcct
ggaacgcagatcgttttagtaggtgatcgtgatcagttaccatcagttggaccgggacaa
atttttgcggatttgatcaatagtgatgcttttccaacaacaatcttaaagaatatccat
cgtcaggatgaagattcaacgattattcaattagctcatgatataaatgaaggaattatt
gttgatggtatttttcaaaatagggctgatcggagtttcatcaattgcgatagtcgaaat
gtccctagtgtcttgtcacagattattgcaaaatcgagtgaacgtggtttcgatattgcc
gatgtgcaagttttagccccaatgtaccgtggtcaagcggggattgataatttgaattat
gtgattcaaaatgttgtcaatccgatgaagccgaaaagaaaagaagtttcgatgggtaat
gttaaatatcgaatcaatgataaagttgtctatttggtcaatacacctgaagacaatgtt
tttaacggcgagattgggaaaattgtcgggataattcttgctaaagaaaataccgaccac
gttgaccaattagtaattgattttgatggcaatgaggtgacattggatcgtaaagattgg
actaatatttctttagcttactgtacttcaatccataaatcgcaaggttcagaatttgaa
atggtaattttgccacttgttaatgaagaatctagaatgttacgccgtaatttgttgtat
acagctgtaacacgtgctaagagattattgatcatggtaggtgataggtcggcttttgaa
cggtcaatcaaagatcaatcgagtgaacgtcagaccacattgaaacaaagaatttttact
acatttaagattaaagtaccagaagcaccatcggaagaagaaacacaagaacaagctcct
atcgattatcgtttgactttagacatgattatgaataatgctattgacccgatgattggt
atggaacacataactcctcaagattttttggagaaaaaataa
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