Companilactobacillus pabuli: G6534_04905
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Entry
G6534_04905 CDS
T07234
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cpab
Companilactobacillus pabuli
Pathway
cpab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G6534_04905 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpab03019
]
G6534_04905 (recQ)
03400 DNA repair and recombination proteins [BR:
cpab03400
]
G6534_04905 (recQ)
Enzymes [BR:
cpab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G6534_04905 (recQ)
Messenger RNA biogenesis [BR:
cpab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G6534_04905 (recQ)
DNA repair and recombination proteins [BR:
cpab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G6534_04905 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QMT84001
UniProt:
A0A7L7KW02
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All DBs
Position
1017224..1019032
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AA seq
602 aa
AA seq
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MKLEAILKEEFGYDTFRPGQKELIQMVLDGKKAMGIMPTGGGKSICYQLPATIMSGLTLV
VSPLISLMKDQVDSLNEDGIPATFLNSTVEWHDREERMRYIESGAVKLLFVAPEKIVDEE
FYSWLSSLDISLIAIDEAHVLSSWGHDFRSSYLEMIQPLKNLSADCAWLALTATATEEVQ
ADLARILDVPDENIIKTGFDRDNLALKIERGVDKIDYVLNYVKSHPDESGIIYAGRREDV
DKIYNFLKENDVSVGRYHAGLSDSERHNQQEDFLFDRINVIVATNAFGMGINKTNVRYVL
HFTVPGTIENYYQEVGRAGRDGLPAEAVLLYTPADLRLHQFFINKSLGDDQYKLSLRKKL
FEMSRYAETQTCLMKFILDYFGETNTQVCGRCSNCLDDREVVDVTADAQKALSCVVRMGQ
NFGKKMITRVLVGKDDVANDWHHFEELSTFGIFEDWTLKETSRFIEFLAANGYLTGSGGK
YPTLKLSEKGVDVLKGKINVARRQDLPKYKPENVTKSRTIVADGSFDMDLFEKLRALRTK
WARKQALPPFMIFSDKTLKDMCVKNPVTEADFLNVSGVGKVKLEQYGESFLNEIKEYQAS
EV
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattagaagctatcttaaaggaagaatttggttacgatacgtttcgtccaggtcaa
aaagaattgattcaaatggtcttagacggcaaaaaagccatggggatcatgccgactggt
ggcggtaaatcaatttgttaccagttgccagctacaattatgtcgggactgactttagtc
gtttcaccattgatttcgttgatgaaagaccaagtggatagtttgaatgaagatggtatt
ccggcaacttttttgaatagtactgttgagtggcacgaccgcgaagaaagaatgcgttac
atcgaaagtggtgcggtcaaactgttatttgttgcaccggaaaaaatcgtcgatgaagag
ttttatagttggttgtcaagtttagatatttcattgattgcgattgatgaagcccacgtt
ttgtcgtcttggggtcatgattttcgcagtagctacttggaaatgatccaacctttaaaa
aacttatcggctgattgcgcatggttagctttgacagctacggctacagaagaagtccaa
gccgatttagctagaattttggatgttcccgatgaaaatatcattaaaactggtttcgat
cgcgataatttggccttaaagattgaacgtggcgtagataaaattgattatgttttaaat
tatgtgaagtcgcatccagacgaatctggtattatttatgccggtcgtcgagaagatgtt
gataaaatctacaattttttgaaagaaaatgatgtttcagtcggtcgctaccacgctggg
ttaagtgattcggaacgtcacaatcagcaagaagattttctatttgaccgaatcaacgta
atcgttgcgacaaatgctttcggaatgggtatcaataagactaacgtgcgctatgtgctg
cattttacggtacctgggacaattgagaactattatcaagaagttggtcgtgcaggacgt
gatggattgccagctgaagcagttttattgtatacgccagcagatttgcgcttgcatcaa
tttttcatcaataaatccttaggtgatgatcaatacaagttgagtttgcgtaagaaacta
tttgagatgagtcgttatgctgaaacgcagacgtgtctgatgaagtttattttggattac
tttggggaaacgaatacccaagtttgtggtcgctgttctaactgtttagatgaccgtgaa
gtggtggatgtaacagctgatgcccaaaaagccttgagctgtgtcgttagaatgggacaa
aacttcggtaagaagatgattaccagagttttagtcggcaaagatgacgtagcaaatgac
tggcatcattttgaagaactgtcgacttttggtatttttgaagattggaccttaaaagaa
acgagccgttttattgaatttttggcagccaatggttatttgaccgggtcaggtggtaag
tatccaaccttgaaattgtcagaaaagggcgttgacgtcttaaaaggaaaaattaacgtg
gccagacgtcaagatcttccgaaatacaaaccagaaaacgttactaagagtagaaccatt
gtggctgatggcagtttcgatatggatctattcgagaaattacgtgctttgagaacgaag
tgggcgagaaaacaagctttgccaccatttatgattttttcagataagactttgaaagat
atgtgcgtgaaaaatccagttactgaagccgacttcctcaacgtcagtggagtgggtaaa
gtaaaactagagcagtatggtgaaagcttcttaaatgaaattaaagagtatcaagcttca
gaagtgtag
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