Companilactobacillus pabuli: G6534_05125
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Entry
G6534_05125 CDS
T07234
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K03701
excinuclease ABC subunit A
Organism
cpab
Companilactobacillus pabuli
Pathway
cpab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G6534_05125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpab03400
]
G6534_05125
DNA repair and recombination proteins [BR:
cpab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G6534_05125
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G6534_05125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
UvrA_DNA-bind
nSTAND1
AAA_29
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_23
nSTAND3
PRK
AAA_15
AAA_16
DUF463
AAA_25
cobW
DUF2024
YobI-ATPase
RNA12
Cytidylate_kin
Phage_min_cap2
zf-C2H2_3
Motif
Other DBs
NCBI-ProteinID:
QMT84041
UniProt:
A0A7L7KW85
LinkDB
All DBs
Position
complement(1058388..1060898)
Genome browser
AA seq
836 aa
AA seq
DB search
MDKKIEVRGGKVNNLKNINVDIPLNKFVAISGPSGSGKSSLAMGILYAEGSRRYLEALST
YTRRRISQSKRSDVQEVKHIPSAIALRQRPGVPSERSTVGSMSEIFNVIRLIFSRLGSTV
CPNGHRIKPSLKIAQAMDLPGDRMGVITCPVCGVEFMAKSAEDFAFNSGGACVQCHGTGK
IRELDESKLIGDESLTLDQGVVASWHLPGRNFMPTVAATLGVRTDVPYKDLTDKEKNIVL
HGEKKQYSVDFRTSTGRVFHTDKTLYENAYEAVYDSLKTVKSERSINKINQFFHFSVCPT
CHGTRLNPELLTQIVGKKNIAEVSDLTLGKLGDWEVQTKSELPQELQAMARVLFKNLHDT
LQPLLDLGLDYLTLSRNGNTLSTGELQRIQLAKTLRTETTGVLYVLDEPSIGLHPDNVKG
LINIFHKLIDQGNSLVVVDHEVDIINAADWVIEIGPGSGDAGGNVIAQGTPQELVHDKNS
LIGPFISGKANIMHEKVPSKKNAADLTTNFEVKDYFNLHDISASIPGNKITAITGFSGAG
KTSLILDSLVPAIESKKNKQALPKQVTKLDTKLTNVVSIDAKPVGKNTRSSLATYTTIMD
NLRRMFADLPESKARKYTISNFSYNNKQGACEHCGGIGKISLDIQYLPDMVEVCPYCHGN
RFKDEIQQIHWHGYSIVDLLNLSVKDALKIFESVPKIEKQLKLLDEIGLNYLHLGESTPE
LSGGEAQRLKLVNHLNGKQDKTMFVFDEPSVGLHPIDVQTLLGVMNKLKSEGATIIIITH
DLDLMTNADYLIDLGPKGGAAGGKLMAAGDPSKLVENASSLTIDYLKEHFQKFNLE
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaaattgaggttcgaggaggaaaggtcaacaatttaaaaaatatcaatgtt
gacatccctttgaataaatttgtggctatctctggaccatccggatcggggaaaagctcg
ttagctatgggtatcttgtacgctgagggttcgagaagatacctagaagctttatcaact
tatacgagaagacgaattagccaaagtaaacgttcagatgtccaagaagttaagcacatt
ccttcagcaatcgctttacgtcagcgtcctggagttccttccgaaagatcgactgttggt
tcgatgagtgaaatttttaatgttattagattgattttttcacgtttaggatcaacggtt
tgtccaaatggtcaccgaataaaacctagtcttaaaatagctcaagcgatggatttaccg
ggagaccgtatgggagtgattacttgtcccgtctgtggtgttgaattcatggccaagtca
gccgaagatttcgcctttaattctggtggtgcctgtgtgcaatgtcatggtactggtaaa
attcgtgaattagatgaaagtaaattaatcggcgatgagtcattaacacttgatcaagga
gtggttgcttcatggcaccttcctggaagaaatttcatgccaactgttgcagcaactcta
ggagtccggactgatgttccttataaagatttaactgataaagaaaaaaatatcgtttta
cacggtgaaaagaaacaatattcggttgacttcaggacttcgaccggtcgtgtttttcac
actgataaaacactgtatgagaacgcctatgaagcagtttatgactctttaaagactgtt
aaaagtgaacgttctatcaataaaattaatcaatttttccatttttcagtatgtccaact
tgtcacggaacacgtttgaatcctgaattattaacacaaatcgtcggcaagaagaatatt
gctgaagtatctgatttaaccctaggtaaacttggtgattgggaagtacagacaaagtca
gaactacctcaagaattgcaagccatggctagagtactttttaagaatttacatgatacc
ttacagccactgcttgatttaggactagattatttgaccttatcaagaaatggtaatact
ttgtcgaccggtgaactgcaacgaattcaattggcaaagactttaagaactgaaacaact
ggtgttctttacgttttagatgaaccatcaattgggctacatcctgataacgttaaaggt
ttgatcaatatttttcataaattgattgatcaagggaactctttagtagtcgttgatcac
gaagtcgacatcatcaatgctgctgactgggtgattgaaattggtccgggttctggagat
gccggtggaaatgttatagctcaaggcacgccgcaagaattagttcatgataagaattcg
ttaatcggtccgtttatttctggaaaagcaaatattatgcatgaaaaggtaccttcaaag
aaaaatgctgcagatctaacaacaaatttcgaagttaaagattatttcaatctacacgat
atctcagcttcaatacccggaaataaaataactgctattactggtttttcaggagctgga
aagactagcttgattttggatagtttagtaccagctattgagagtaaaaagaacaaacag
gcattacccaaacaagttacaaaactagataccaaattaactaatgttgtcagcatcgat
gctaaaccagttggtaaaaatacgcgatcaagtttagcaacttatacgacaatcatggac
aatttaagacgcatgtttgctgatttgcctgaatctaaagctagaaaatatactatttcg
aacttttcctataataataaacaaggtgcttgcgaacattgtggtggtatcggaaaaatt
tccttagatattcagtatcttccagatatggtcgaagtttgtccatactgtcatggcaat
cgtttcaaggatgagatccaacaaattcactggcacggttattccattgttgatttactc
aatttatcagttaaagatgcattaaagatttttgaatctgttccaaaaattgaaaaacaa
ttaaagctattggacgaaatcggactaaattacttacatctcggtgaaagcactccagaa
ttatctggtggggaagctcaacgattaaagttggttaatcatctgaatggcaaacaggat
aagactatgtttgttttcgatgaaccatctgtcggtttacatccaattgatgttcaaaca
ttgctcggcgtcatgaataaattaaaatcagaaggagcaacgattattatcattactcac
gatttagatttgatgaccaacgctgattacttaattgacttaggtccaaaaggtggtgcc
gctggtggtaaattaatggctgccggtgatccaagtaaattagttgaaaatgcatcaagt
ttaacaatcgattacttaaaagaacatttccaaaaatttaatttagaataa
DBGET
integrated database retrieval system
