Companilactobacillus pabuli: G6534_07550
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Entry
G6534_07550 CDS
T07234
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
cpab
Companilactobacillus pabuli
Brite
KEGG Orthology (KO) [BR:
cpab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpab03019
]
G6534_07550
03009 Ribosome biogenesis [BR:
cpab03009
]
G6534_07550
Enzymes [BR:
cpab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G6534_07550
Messenger RNA biogenesis [BR:
cpab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G6534_07550
Ribosome biogenesis [BR:
cpab03009
]
Prokaryotic type
rRNA helicases
G6534_07550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
DUF2608
PhoH
Microtub_bd
Flavi_DEAD
CC_BshC
Motif
Other DBs
NCBI-ProteinID:
QMT84484
UniProt:
A0A7L7KZS0
LinkDB
All DBs
Position
complement(1548819..1550159)
Genome browser
AA seq
446 aa
AA seq
DB search
MTKFSQYNFNDAINKSLKEIHFEEPTPVQEAVISLINKKKDIIVQSETGSGKTHAFLLPS
MNALTSDQEVQLLIATPSRELAYQIYEDTQAILKNYPEEYNAFIFVGGADRDRQRRKLEA
HQPQIAIGTPGRLWDLISDNSLHVENVQRYVIDEADMTLDMGFLDVVDKITDKLPEDREM
MVFSATIPQKLEPFLKKYMHGPQRVEIKNNSIIPKNVDNWLMFSHGRDKKEIIYQLMTIG
EPYLVLVFANTKKTVDEIYHYLRNKGLKVARIHGGLTPRERKRTMKQVENMEYQFVVATD
LAARGIDINGVSHVINAEIPDDLDFFVHRVGRTGRNKMSGIAITLYDPGEENKIDAIEHM
GITFEPKDIKNGEIVEAVERDRRFTRKANQEKLDTKLVGYVKKQKTKKKPGYKKKIKKAI
NEEHRQQRKIKIRQERRKQRDARRNS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgactaaattttcacaatacaactttaatgatgctattaacaaatcattaaaagagata
cattttgaagaaccaactccagtccaagaagcagtaatttcattgatcaacaagaagaag
gatattattgttcaatcagaaacaggttctggtaaaacacatgctttcttattgccatca
atgaatgccttgactagtgatcaagaagtacaacttttgattgcgacacctagccgtgag
ttggcataccaaatttatgaagatacacaagcaattttgaaaaactatcccgaagaatac
aatgcctttattttcgttggaggagctgacagggatcgtcaaagaagaaaactagaagct
caccaaccacaaatcgctattggtactcccggaagactttgggaccttatcagtgacaat
tctttacacgttgagaacgttcaaagatacgtcattgatgaagctgatatgaccctagat
atgggattcttggatgttgtcgacaagattactgacaagttgccagaagaccgtgaaatg
atggtcttttcagctacaattccacaaaaactagaaccattcttgaagaaatacatgcac
ggacctcaaagagttgagatcaagaacaacagtattattccgaaaaacgttgacaactgg
ttgatgttctcacacggtcgtgacaagaaagaaattatttaccaattaatgacgattggt
gaaccttacttggtcttagtatttgctaatactaagaagactgttgacgaaatttatcat
tatcttcgtaacaaaggtctcaaagtcgctcgtatccatggtggtttaacacctagagaa
cgtaagcgtacgatgaaacaagttgaaaatatggaatatcaattcgtagttgcaactgat
ttggctgcacgtggaattgatatcaacggtgtttcccatgttattaatgctgaaattcct
gacgatttggacttcttcgttcaccgtgttggtagaactggtcgtaacaagatgtcaggt
attgccattactttgtacgatcccggtgaggaaaacaagatcgatgctattgaacacatg
ggtatcacttttgaacctaaggacatcaagaatggtgaaatcgttgaagcagttgaacgt
gatcgtcgtttcacacgtaaggctaatcaagaaaaacttgatactaaattagttggttac
gttaagaaacaaaagacgaagaaaaaacctggctacaagaagaagatcaaaaaggcgatc
aatgaagaacatcgtcaacaaagaaagatcaagattagacaagaacgtagaaaacaaaga
gatgcaagacgtaatagctag
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