Companilactobacillus pabuli: G6534_08740
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Entry
G6534_08740 CDS
T07234
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpab
Companilactobacillus pabuli
Pathway
cpab03420
Nucleotide excision repair
cpab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G6534_08740
03430 Mismatch repair
G6534_08740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpab03400
]
G6534_08740
Enzymes [BR:
cpab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G6534_08740
DNA repair and recombination proteins [BR:
cpab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G6534_08740
MMR (mismatch excision repair)
Other MMR factors
G6534_08740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
SLFN-g3_helicase
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PhoH
DEAD
YidB
NACHT
APP1_cat
AAA_11
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QMT84699
UniProt:
A0A7L7KYZ7
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All DBs
Position
1790148..1792421
Genome browser
AA seq
757 aa
AA seq
DB search
MTINQSKDEEQQRVNSVAEKIDNKIKRVDQSIAQAHQETHRIYRNYGENTKVNTFEVDDQ
METNASVQQQKQLVALAVENENILNANRLKLENLQGSPYFGRIDIVEDGEEDTLYIGTST
LQDDDGNFLIYDWRAPISGIYYNGMLGKVHYQTPNGKAEVELKKKRQFQIVKNNIRNMFD
TNETVGDEILQSVLSEYSDEYLKNIVATIQHEQNVIIRDTRSDVLLVQGVAGSGKTSAIL
QRVAYLLYHSRSTMNADNIVLFSPNKLFSNYISEVLPSLGERNMRQVTLNEFISLRLTGV
QVETLFERYEKDERNLPESTVKMRLYKESGDFLDKLAELEEDHPEHILHFEDIIFEGKPF
FTKEEMAEIYDSINHAYHITDRFLKTKNALIKRLQKRIHEDRNEDWVQAEIDNLSDEDFQ
QIITDHNIEESTNQREIIAEEFLKERYAPIYNALINDYFFNPYKEYLFLLNEMDQDLVSD
SVWQTMIEAIDNNIEAHKLNLSDSIAILYLRDIVTDGGVNHSIQHIFIDEVQDYTMAQLK
YISHAFPNAKMTLLGDRAQDVLTSSYRQKDLVTEVNELFSKKRINTITLNQSYRSTAEIT
NFATKLLPNGEEIKAFSRQGEDPVIKVFDDDNYYQGLKETAKELNKKYETVAILTRNQAQ
AEQIYTHFSDESIITLVDADFRSIPKGILVLPIYLAKGLEFDAVIGHDVSDQNYPDSRST
DVLYTICTRAMHSLTLCVDGTVSPLLSNESSDLISEQ
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgacgattaatcaatcaaaagatgaagaacaacaaagagtcaattcagttgctgaaaaa
atcgacaacaagatcaaacgagttgaccaaagcattgcccaagctcatcaagaaacccat
cgtatttatcgcaattacggtgaaaataccaaagttaatacttttgaagtcgatgaccaa
atggaaactaacgcttcagttcaacaacagaagcaattggttgccttggcagtcgaaaat
gaaaatattttaaacgctaaccgtctcaaattagagaatcttcaaggttccccatatttt
ggacgaatcgatatcgtcgaagatggcgaagaagatactctctatattggtacttctacg
ttgcaagatgatgacggaaacttcctaatttacgactggcgtgctcctatttccggaatt
tactacaacggaatgctcggcaaagtgcactaccaaactcctaatggtaaggccgaagtc
gaactaaaaaagaaacgtcaattccaaatcgttaaaaataatattcgtaatatgtttgat
actaatgaaactgttggtgatgaaattctccaatcagtcttaagtgaatacagtgatgaa
tatttaaagaacattgttgccacaattcaacacgaacaaaatgtcattatccgtgacact
cgctccgacgtcttattagttcaaggtgtagctggatctggtaaaacctctgccattttg
caacgtgtagcttacttgctttatcatagtcgttcgacgatgaatgccgacaatattgtc
ttgttctcccctaataaattattcagtaattacatctctgaagtcttacctagtttgggt
gaacgaaacatgcgtcaggttactctaaatgaatttatttctttacgactaactggtgtt
caagtagaaactctatttgaacgttatgaaaaagatgaacgcaatttgcctgaatcaaca
gttaaaatgcgactttacaaagaaagcggcgacttcttagataagttggctgaacttgaa
gaagatcatcctgaacacatcttgcattttgaagatattatctttgaaggtaaacctttc
tttactaaagaagaaatggccgaaatttatgattcaatcaatcacgcctaccatatcact
gatcgtttcttaaagacgaaaaatgccttgatcaaacgtctccaaaaaagaatccacgaa
gatcgtaatgaagattgggttcaggctgaaattgataatttatccgatgaagatttccaa
caaataatcactgaccacaacattgaagaatcaactaatcaacgtgaaattatcgccgaa
gaatttttgaaagaacgttacgcaccaatttataacgccctcatcaatgactatttcttt
aatccttacaaggaatacctcttcttgctcaacgaaatggaccaagatttagtttctgac
agcgtttggcaaacaatgattgaagctatcgacaacaatattgaagctcataaattaaac
ctcagtgattcaattgccatcctttacttacgcgatatcgtcactgacggcggtgttaat
cattcaattcaacacatcttcattgatgaagtgcaagattacacaatggctcaactcaaa
tacatctcccacgcttttccaaatgccaagatgaccttgttgggtgaccgtgcccaagat
gtattaactagttcttatcgtcaaaaagatcttgttaccgaagttaatgaactattcagc
aaaaagcgtatcaacactattacgctaaaccaaagttatcgttcaactgctgaaataact
aactttgctactaaactcttgccaaatggtgaagaaatcaaagctttttctcgtcaaggt
gaagatcccgtaatcaaggtctttgacgatgacaattactaccaaggtttgaaagaaaca
gctaaagaactcaataagaaatacgaaacagtcgctatcttgacacgtaatcaagcccaa
gctgaacaaatttacacccacttcagtgatgaatctattattactttagttgatgctgac
tttcgttctattcctaagggaatcctagtcctaccaatttatttggcaaagggtttggaa
ttcgatgctgttattggacatgacgtctcagaccaaaactatcctgacagtcgtagtact
gatgttctttatactatctgtactcgagctatgcacagtttgactttatgtgtcgatggt
acggtttcaccattattaagtaacgaatcttcagatttgatttctgaacaataa
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