Companilactobacillus pabuli: G6534_09130
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Entry
G6534_09130 CDS
T07234
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cpab
Companilactobacillus pabuli
Pathway
cpab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
G6534_09130
09124 Replication and repair
03420 Nucleotide excision repair
G6534_09130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpab03021
]
G6534_09130
03036 Chromosome and associated proteins [BR:
cpab03036
]
G6534_09130
03400 DNA repair and recombination proteins [BR:
cpab03400
]
G6534_09130
Enzymes [BR:
cpab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
G6534_09130
Transcription machinery [BR:
cpab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
G6534_09130
Chromosome and associated proteins [BR:
cpab03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
G6534_09130
DNA repair and recombination proteins [BR:
cpab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
G6534_09130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
DEAD
ResIII
PhoH
CBFD_NFYB_HMF
RIIa
Motif
Other DBs
NCBI-ProteinID:
QMT84771
UniProt:
A0A7L7KYA8
LinkDB
All DBs
Position
complement(1868032..1870404)
Genome browser
AA seq
790 aa
AA seq
DB search
MATKIGIRQLVEFVLRSGDLNETKNSQNTALNGARIHRRLQKKRSKDPDYQSEVYLKTEV
TMNDNEYLISGRADGLKITDKNALIEEIKTSDQPFEELSDNTLELYWGQVKVYGYLILKD
YPRFDHVTLRLTYFQVSTEKIMTDEQVYSRDDLNKFFKDLINEYEYWLVLRANLRKERNT
SIKKLQFPFPQFRTGQHELAAAVYKTILYETRLFVEAPTGTGKTISTLFPAIKAMGEEKI
QRLFYLTAKQSTRRVAEEAIDLMASKGLKLKSITLTAKDKIRFPEQDVPPDKDPYMIGYY
DRLKPALSDLLTNEDSITREVIEKYAKKHQVDPFEFSLDASLFCDVIICDYNYLFDPLVY
LQRFFIEKDTDNFFLIDEAHNLVSRSRSMYSAQISDQKIASLLKAAKKINTQPSADFQKQ
IKKVRRVFNQMKKVLKEDDLTERITSDVPDKLLNTLSKFNDFMTDWIADQQPSDFLESAK
DYFFDSLTFVKIGALYDDTYKTRIVIEDKNLIVKQLCLDPSHFLDKSLDLGLGAVFFSAT
LSPMDYYQSVLGGKENSLAYQLPSPFPAQNQVIMVTRYIQTTYRQRPFSQDDIVESLHTL
ISGKKGNYLCFFPSYGYLKQIEERFEEEYPEILTVTQTSAMNNVARDEFLNKFQDNPDHT
LLGFCVLGGIFSEGIDLRGNKLIGVAVVSVGLPGLSAENNLIRDYYDQENGHGFEYAYQM
PGMNNVLQAAGRLIRSSHDKGIILLLDQRFASFRYTQLFPNHWQNRQNLNSVKQLQQAVD
KFWKGVSDED
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcgactaaaattggaattcggcaattagtagaattcgtcttgcgcagtggtgattta
aatgagactaaaaatagtcaaaatacagccttgaatggtgcacgaattcaccgtcgtttg
caaaaaaagcgtagtaaggatccagattatcagagtgaagtctatttaaaaactgaagtg
acgatgaatgataacgaatatttgatatcaggtcgtgccgatggtttaaaaatcactgat
aagaatgctctgattgaagaaattaaaacttctgatcaaccatttgaagaattaagcgat
aataccttggaattgtattggggacaggtcaaggtctatggttacttgattttaaaggat
tatccacgatttgatcacgtgactttaaggttaacgtatttccaagttagtaccgaaaag
attatgacggatgaacaagtttatagtcgtgatgatttaaacaaattttttaaggattta
atcaatgaatatgagtattggttagttttgcgcgctaatttacgaaaagaacgcaatact
tcaattaaaaaattacaatttccctttccacaatttcgaactggtcaacatgaattagcg
gcagcagtttataagacgattttatatgaaaccagattattcgttgaagcaccgacgggt
actggaaagacgatttcaacgttgtttccggctattaaagcgatgggagaagaaaaaatt
cagcgactattttatttaacagctaagcagagcaccagaagagtcgctgaagaagcaatt
gatttgatggccagtaagggactgaaattaaagagtattacgttgacagcgaaagacaag
attcgttttcctgaacaagatgttccaccagataaagatccttatatgattggctattat
gatcgtttaaaaccagctttgtcagacttattgactaatgaagacagtattacccgtgaa
gtaattgaaaaatacgctaagaagcaccaagttgacccctttgaattttcactagatgct
tcgttattttgtgatgtgattatttgtgattacaattatttattcgatccgttagtttat
ttacaacgtttctttattgaaaaagatactgataatttcttcttaattgatgaggcacat
aatctagtcagtcgttctcgatcgatgtattcagctcaaatcagtgatcaaaaaattgct
agtttgttaaaagcagccaagaagatcaatacgcaaccaagcgctgattttcaaaaacaa
ataaagaaagttcggcgagtattcaatcagatgaagaaagtcctaaaagaagacgattta
actgaaagaattacttctgatgtcccagataaactattgaatactttgagtaaatttaat
gactttatgactgattggatagcagaccaacagccgtcggattttctcgagagtgccaaa
gattacttcttcgatagtttaacgtttgtcaaaatcggagcgttatatgacgatacttat
aagacaagaatcgtgattgaagataaaaatctaattgttaaacagttatgcttagatcct
agccacttcttagataagtcgttagatttagggttaggagcagtgtttttttcagctacg
ttatcgccaatggactattatcaaagcgttttaggtggcaaagaaaacagtttggcatat
caattaccgtctccttttcctgcacaaaatcaagttattatggtcacacggtacattcaa
acaacttatcgacaacgtccttttagtcaagatgatatcgttgaaagtttacatactttg
attagcggtaaaaaaggtaattacttatgttttttcccttcgtatggctatttaaagcag
attgaagagcgttttgaggaagaatatccagaaattctaacagttacacagacaagtgca
atgaataatgtggctcgtgatgaattcttaaataaatttcaggataatcctgatcataca
ttattaggattttgcgttcttggtggaattttttcggaaggtatcgatttacgaggtaat
aaattaataggtgttgccgttgtcagcgtgggattacctggacttagtgcagagaataat
ctgatacgtgattattatgatcaggaaaatggacatggttttgaatatgcttatcagatg
cccggtatgaataatgttttgcaagctgctggaagattgattcgcagtagtcacgacaag
ggaattattttgttgttggatcagcgttttgctagttttcgttatacacagcttttccct
aatcattggcaaaatcgacagaatttaaattcagtaaagcaactacaacaagctgtggat
aagttttggaaaggagtttcagatgaagactaa
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