Clostridium pasteurianum DSM 525 = ATCC 6013: CPAST_c13360
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Entry
CPAST_c13360 CDS
T03811
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpae
Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpae03420
Nucleotide excision repair
cpae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPAST_c13360 (pcrA)
03430 Mismatch repair
CPAST_c13360 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpae03400
]
CPAST_c13360 (pcrA)
Enzymes [BR:
cpae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPAST_c13360 (pcrA)
DNA repair and recombination proteins [BR:
cpae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPAST_c13360 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CPAST_c13360 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_14
DEAD
FOG_N
EGF_PEAR1L
Motif
Other DBs
NCBI-ProteinID:
AJA47435
UniProt:
A0A0H3J8N5
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All DBs
Position
1437583..1439874
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AA seq
763 aa
AA seq
DB search
MDLKKLLNKEQYEAATAVDGPVLVLAGAGSGKTRVLTYRIANMIENLNVYPSQILAITFT
NKAAQEMKERVRALVGSEADNMWVSTFHSTCVRILRREIDKIGYNKNFTIYDSADQKTLI
NQCIKEVGINDKDITDKEIISKIGAQKDNLVSAQEYKRKNENNFKLNRIAEVYLLYQKKL
KENNALDFDDLIFKTVELFKKQEDVLQFYQRKFRYIMIDEYQDTNKAQYELARLLAKEHK
NICVVGDDDQCIYGWRGADIRNILDFEKDYRDAKVIKLEENYRSKANILKAANGVIKNNP
HEHFKLLRTRNEDGSKIKLYRSYSDMEEVEFVANEIKKAMDSGDRTYKDFAVLYRTNAQS
RLFEDIFMKRHIPYRIIGGLKFYDRKEIKDIMAYLKLISNPLDNISLKRIINVPKRGIGA
TTVDKIEKFANEIEECLYSCLLDIQNIPGLTARNVSSINKFISIINSFVIRKDEIKVSTL
IEELLGQTGYLQELKKSNDLQDETRIENLQELVSAAVDFENNSEDKSLSAFLEKTALVAD
VDNYDEESDSVVMMTVHSAKGLEFPVVFMVGMENGIFPGAASLSDFTEMEESRRLAYVGI
TRAKEELYMTSAQTRKIFGRTVGYAESDFIAEIPKELKEYVNIDVRKGNAFNKFLGSNNL
NKNDNSRFSFNKDIPPKNRVFDKGFSTQYTESILKSNGISEKKEIKVLSEDEATAGRKVK
HSKFGEGTIVAVSKKDGNVNLTIAFKNMGIKNLRLDLAPLQII
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaaaaactattaaataaagaacaatatgaggcggcaacagcagtagatgga
cctgtactggtattagcaggagcaggatcaggtaaaactagagttcttacttatagaatt
gctaatatgattgaaaatttgaatgtctatccatcacaaatattagctataacttttact
aataaggcggctcaggaaatgaaggaaagagtccgcgctcttgtgggcagtgaagctgat
aatatgtgggtatcaacatttcattccacctgtgtgagaatacttagaagagaaatagat
aaaattggatacaataaaaattttacaatatatgatagtgcagatcaaaaaactttaata
aatcaatgcataaaagaagttggtatcaacgataaggatataactgataaagaaataata
tctaaaataggagctcagaaggacaatttagtatctgcacaagaatacaaaagaaagaat
gagaataactttaaattaaataggattgcagaggtttatcttttgtatcagaagaaactt
aaagaaaacaatgctttagactttgatgatttaatatttaaaactgttgaattatttaag
aaacaagaagacgtactgcaattttaccagagaaaatttagatacataatgatagatgaa
tatcaagatacaaataaagctcagtatgaattggcaagactactagcaaaagaacataag
aatatatgcgtggtgggagatgatgatcaatgcatatacggatggagaggagcagatata
agaaatatacttgactttgaaaaggactatagggatgctaaagtaataaaactggaagaa
aactatagatcaaaggcaaatatactaaaagcagccaatggggtcattaaaaacaatcct
catgagcattttaaactacttagaaccagaaatgaagatggaagtaagataaaactgtat
agaagttactcggatatggaagaagtggaatttgtggctaacgagataaaaaaggctatg
gattcaggagatagaacctataaggactttgctgtactctatagaactaatgctcaatca
agattatttgaagacatatttatgaaaaggcatattccctatagaataattggtggatta
aaattctatgatagaaaagaaattaaagatataatggcttatcttaagcttatatccaat
ccactagataatataagtttaaagagaattataaatgtacctaaaagaggtataggagct
actactgtagacaaaattgaaaagtttgccaatgaaattgaagaatgcctttatagttgt
ctattagatatacaaaatataccaggacttactgcacgaaatgtctcttctataaataaa
tttataagtataataaatagctttgttataagaaaagatgagataaaagtttctacgtta
attgaagaacttcttggacaaacaggatatctgcaggaattgaagaaatccaatgatttg
caagatgaaacaagaatagagaatcttcaagaattggtttctgctgctgtggattttgaa
aataactcagaggataagtctctttcggcttttctggaaaagacagctttagttgcagat
gtggataattatgatgaagaatcagactctgttgtgatgatgacggttcacagtgctaaa
ggactagaatttccagtagtgtttatggtgggaatggaaaatggtattttccctggagca
gcatctttgtcagactttactgaaatggaagaatcaagaagactagcctatgtaggtatt
acaagagccaaggaagaattatatatgacttcagcacagacgagaaaaatttttggaagg
actgttggctatgctgaatctgattttatagcagaaattccaaaagaattaaaggaatat
gtgaatatagatgtaagaaaaggaaatgcctttaacaagtttttaggaagtaataattta
aacaaaaatgataacagcagattttcctttaacaaggatataccaccaaaaaatagagtg
tttgacaagggattttctacacaatatactgaaagtatattgaaatctaatggaatttca
gaaaagaaagagataaaagtacttagtgaagatgaagctacagcaggcagaaaagtaaaa
cattctaaatttggagaaggaaccattgtagccgtcagcaagaaagatggaaacgtaaat
ttaactatagcttttaaaaatatggggataaaaaatctaagattggacttagcaccttta
caaataatataa
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