Clostridium pasteurianum DSM 525 = ATCC 6013: CPAST_c18540
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Entry
CPAST_c18540 CDS
T03811
Symbol
spoVD1
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
cpae
Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpae00550
Peptidoglycan biosynthesis
cpae01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpae00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CPAST_c18540 (spoVD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cpae01011
]
CPAST_c18540 (spoVD1)
Peptidoglycan biosynthesis and degradation proteins [BR:
cpae01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CPAST_c18540 (spoVD1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
Beta-lactamase2
PBP_dimer_2
Cortexin
DNA_Packaging_2
Peptidase_C10
Motif
Other DBs
NCBI-ProteinID:
AJA47924
UniProt:
A0A0H3J384
LinkDB
All DBs
Position
1995102..1997294
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AA seq
730 aa
AA seq
DB search
MSKRTYRDHVMIKNRLFFVLIIFIIIFALLVCRLFKVNVILSPKYKKMAVDQWTSEVKIS
AKRGKILDRNGQELAVSGNVYRVDLDLSTIRADLNSTKKMDMNTLAQKLAEATGKKTEDV
NKLLNYKLPNGNPAGSATLARRVEKDVADKVSDIKVNGIIVSPDTKRYYVNNNFLAQVIG
HTNSDGKGLTGVELEYDNYLSGTPGKRIAEIGKNSKDLPYTISDYTKPSNGKDVVLTIDE
NIQEFAEKNAQQALSDNKAKAVSIVVANPKNGEILAMVNKPDYNPNDPWEKGKSFNELQS
EWRNRAVNDAYEPGSIFKVITATAAMEEKVVKETDQFNCTGAITIANKIIHCWKRTGHGQ
ESFVDIIKNSCNVGFATLGQRLGAANLNKWINKFGFGQKTGIDLPGEAKGIVKATNKITP
VDVATIAFGQANTVSMVQYLSAFNAVANNGVWVRPHVMKKIVHYDSNNKEIIDKNYDDYG
TKKVVDENVAKELRGYLEKVISEGGGKKAFIDGYHIAGKTGTAQKPNPKGGGYESGKYVA
SFAGMAPAEDPQVTVMVSIDEPDPSNYYAGQIATPVAKQMFSDIFNYLNIKTEASNEDVT
KSMLNDVVVPNVRGMKISDAQKILKENNLTFDADQNGDYVTNMTPLPGATVKEGTKIILY
TGSSPNYNNKDIEVPDLDGLSKEKASQILEELGLKANFSGQGMVSEQDITEGTRVQKGTT
VNLELEIIGD
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaaaagaacatatagagaccatgttatgataaaaaatagattattttttgtattg
attatttttatcattatatttgctttactggtttgcagattgtttaaagtaaatgttatt
ttgtctcctaagtacaaaaaaatggctgttgatcaatggacaagcgaagtaaaaatatct
gcaaagagaggaaaaatactggatagaaatggacaagaattggcagttagtgggaatgtg
tatagagttgatttggatctaagtactataagagctgatttgaattctactaagaagatg
gacatgaatactttagctcaaaagctggcggaagctactggtaaaaaaactgaagatgta
aataagctattaaactacaaacttccaaatggaaatcctgcaggatctgctactttggct
agaagagttgaaaaagatgtagcagacaaagtatctgatataaaagtaaatgggattatt
gtttcaccagatacaaagagatactatgtaaataataattttttggcccaggtaattgga
catactaattccgatggtaagggtttaactggagttgaattggagtatgataattattta
tctggaactccaggaaagaggattgctgaaataggtaaaaatagtaaagatttgccctat
actatttccgattatacaaagccttctaatggaaaagatgtagtacttactattgatgaa
aatattcaggaatttgcagaaaaaaatgctcaacaggcacttagtgataataaagctaaa
gcagtttcaattgtagttgctaatcctaaaaatggagaaattttggctatggtaaataaa
ccagattataatccaaatgatccttgggagaagggaaaaagtttcaatgaacttcaaagt
gaatggagaaatagggctgttaatgatgcttatgaacctggatcaatttttaaagttata
actgcgacagcagctatggaagaaaaagtagtaaaagagacggatcaatttaattgtact
ggtgctataaccattgcaaataagataatacattgctggaagcgtacaggacatggccag
gagagttttgtagatataataaagaactcttgtaatgtgggatttgcaactcttggtcag
agacttggagctgctaatttgaataagtggattaataaatttggctttggccaaaagacg
ggcatagatttacctggagaagccaaggggatagttaaggcaacaaataaaattactcct
gtagatgtagctacaatagcttttggtcaggccaatacagtatccatggttcaatactta
agtgcttttaatgcagtagctaataatggagtatgggtaagacctcatgtaatgaaaaag
atagttcattatgattcaaataacaaagaaattatagataaaaattatgatgactatggt
actaaaaaagtggtagatgaaaatgtggcaaaagagcttagaggttatcttgaaaaggta
atatcggaaggtggaggtaaaaaggccttcattgatggctatcatatagctgggaaaact
ggtactgcacaaaaacctaatcctaagggcggcggttatgaatctggaaaatatgtggca
tcttttgctggaatggcaccggctgaagatccacaggttactgtaatggtatctattgat
gagccagatccttcaaattattacgcaggacaaatagctacgccagtggctaaacagatg
ttcagtgatatattcaattatctaaatataaaaactgaggcttctaatgaggatgtaaca
aaaagtatgttaaatgatgtagtagttccaaatgtaaggggtatgaaaatatctgatgca
cagaaaatattgaaggaaaataatttaacttttgatgcagatcaaaatggtgactatgtt
acaaatatgacgcctcttccaggagctactgttaaagagggaacaaaaataatactttac
actggcagcagtccaaattataataataaagacatagaagtaccagatttggatggatta
agcaaagaaaaagcttcacagatccttgaggagttaggattaaaggccaatttttcaggc
cagggaatggtatctgaacaggatataacggaaggaacaagagttcagaagggaactaca
gtgaatttggaacttgaaattataggtgattaa
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