Clostridium pasteurianum DSM 525 = ATCC 6013: CPAST_c18730
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Entry
CPAST_c18730 CDS
T03811
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cpae
Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpae00300
Lysine biosynthesis
cpae00470
D-Amino acid metabolism
cpae01100
Metabolic pathways
cpae01110
Biosynthesis of secondary metabolites
cpae01120
Microbial metabolism in diverse environments
cpae01230
Biosynthesis of amino acids
Module
cpae_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
cpae_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cpae00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CPAST_c18730 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CPAST_c18730 (dapF)
Enzymes [BR:
cpae01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CPAST_c18730 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
Pro_racemase
DUF4396
Motif
Other DBs
NCBI-ProteinID:
AJA47943
UniProt:
A0A0H3J7Q2
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All DBs
Position
2014096..2014923
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AA seq
275 aa
AA seq
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MNFVKMQGTGNDFVVLEDGDNKFLNRESDIAKIICDRHFGIGADGILLIRNSDVADVEMV
IINSDGSYAAMCGNGIRCFAKYVYDEGVMKKQKISIKTGDGIKIAEIIDENGKAKGIKIN
MGSPSFISKDIPANVDKEIINYDVNINNKTYKLNSMLMGVPHTVILGKLNDFDVKEGSFI
EKYKELFPEGTNVNFCEVEDRENIKVKTWERGAGATLACGTGCCASAVACNKLGFTDKKV
KVSVPGGNLEVEICDEAVYMIGGAEITFRGETDLI
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgtaaaaatgcagggtactggaaatgattttgttgtcttggaggatggagat
aataaatttttaaatagagaaagtgatattgcaaaaataatttgtgatagacattttggc
ataggagcagatggcatacttttaatcagaaatagtgatgtagctgatgtggagatggtt
ataatcaattcagatggatcctatgctgctatgtgcggaaatggaataagatgttttgca
aaatatgtatatgatgaaggagttatgaaaaaacaaaaaataagtataaaaactggcgat
ggtataaaaatagctgaaattatagatgagaatggtaaagccaagggaataaagataaat
atgggatctccaagttttatatcaaaggatattcctgcaaatgtagataaagaaattata
aattatgatgtaaatataaataataaaacttataaattgaattcaatgcttatgggagta
cctcatacggttattttgggaaaattaaatgatttcgatgtaaaggaaggaagttttata
gaaaagtataaggaactttttccagaaggaactaatgttaatttctgtgaagtagaagat
agagaaaatataaaagttaaaacctgggagagaggagcaggagccactcttgcctgtggt
acaggatgttgtgcctcagctgttgcatgtaacaaattggggtttactgataaaaaagtt
aaagtttcagttcctggtggaaacttagaagtagaaatatgtgatgaagcagtatatatg
ataggcggtgcagaaattacttttagaggagaaactgatctcatatga
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