Clostridium pasteurianum DSM 525 = ATCC 6013: CPAST_c22310
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Entry
CPAST_c22310 CDS
T03811
Symbol
ruvB
Name
(GenBank) holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cpae
Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CPAST_c22310 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpae03400
]
CPAST_c22310 (ruvB)
Enzymes [BR:
cpae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPAST_c22310 (ruvB)
DNA repair and recombination proteins [BR:
cpae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CPAST_c22310 (ruvB)
RecFOR pathway proteins
CPAST_c22310 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
RNA_helicase
nSTAND3
ResIII
AAA_16
AAA_2
Bac_DnaA
NTPase_1
AAA_14
AAA_22
MCM
NB-ARC
AAA_18
AAA_24
AAA_3
TsaE
Parvo_NS1
ABC_tran
Sigma54_activ_2
AAA_17
AAA_28
DUF815
IstB_IS21
Resolvase
NACHT
NPHP3_N
AAA_11
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AJA48301
UniProt:
A0A0H3J2Z8
LinkDB
All DBs
Position
complement(2396970..2398013)
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AA seq
347 aa
AA seq
DB search
MEERIVSSVNLNEDLDVEYSLRPQRLKEYIGQNKVKEKLSIFVKAAKKRKEALDHVLFYG
PPGLGKTTLANIIAREMKGNLKITSGPAIERAGDLAAILTSLSEFDVLFIDEIHRLNRSV
EEILYPAMEDYALDIVIGKGAAAKSIRLDLPKFTLIGATTRVGLLTSPLRDRFGVMCPME
FYKDEELKEIIVRSSSILKVGIEEKAALEIARRSRGTPRIANRLLKRVRDYSEVMGNGTI
DIPSSEKALELLEIDKEGFDKIDNKILEAIVDNFNGGPVGLETLAYFIGEELDTLDDVYE
PYLLQKGFIMRTPRGRVATDKTYKHLNRPISSDRNYTQCSVFKENRK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaggattgtaagttctgtaaatttaaatgaagacttagatgtagaatatagt
ttaagaccccaaagattaaaagaatatatagggcaaaataaggtaaaggaaaagctcagt
atatttgtaaaggcggcaaaaaagagaaaagaagctttagatcatgttttattttatgga
cctccgggacttgggaaaactactcttgcaaatattattgcaagggaaatgaagggaaat
cttaaaataacttcaggaccggctatagaaagagctggagatttagctgctatattgact
agtctatctgaatttgatgtattatttatagatgaaattcatagacttaatcgaagtgtg
gaagagatattatatcctgctatggaggattatgctttagatatagttataggtaaagga
gcggctgctaagtctataagattagacttgccaaaatttactctaattggagctactact
agagttggacttttaacttcacctcttagggataggtttggagtaatgtgtcctatggag
ttttataaagatgaagaacttaaagagataattgtcagatcatcttcaatattaaaagta
ggtatagaggaaaaagcagctcttgaaatagcaagacgttctaggggaactccaagaatt
gccaataggcttttaaagagagttagagattattcagaagtaatgggaaatggaactatt
gatattccttcttcagaaaaagctttggaactattggaaatagataaagaaggttttgat
aaaatagataataaaattttggaagctatagttgataatttcaatggtgggccagtagga
cttgagaccttagcttactttataggggaggaactggatactttagatgatgtttatgaa
ccttatttacttcaaaaaggatttataatgagaactccaaggggaagagtggctacagat
aaaacttataagcatttaaatagacctataagttctgatagaaattatactcagtgttct
gtatttaaggaaaataggaaatag
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