Clostridium pasteurianum DSM 525 = ATCC 6013: CPAST_c22890
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Entry
CPAST_c22890 CDS
T03811
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
cpae
Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpae02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cpae00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CPAST_c22890 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpae03021
]
CPAST_c22890 (sigA)
Transcription machinery [BR:
cpae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CPAST_c22890 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
HTH_PafC
DUF3791
Motif
Other DBs
NCBI-ProteinID:
AJA48359
UniProt:
A0A0H3J4F5
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All DBs
Position
complement(2458261..2459382)
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AA seq
373 aa
AA seq
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MKENKQVQVKTRGTNKETDLKTQSEKMQFVKKLVDKGRKKGNLTYKEIMDELENIDLSPE
QIEKVYEVLETMGIDIIGDIQDIEVEEEELDLSVPEGIAIDDPVRMYLKEIGKVPLLAPD
EEINLAQRIEDGDQVAKKKLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNLGLIKAVEKF
DYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPQ
AEEIAKIMEMPVDKVREIMKIAQEPVSLETPIGEEEDSHLGDFIPDDEAPAPAEAAAFTM
LKEQLINVLDTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLR
HPSRSKKLKDYLD
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaaataagcaagttcaagttaaaactagaggtacaaataaagagacggattta
aaaactcaaagtgagaaaatgcaatttgtaaaaaaacttgtggataagggcaggaaaaaa
ggaaatttaacttataaagagataatggatgaattagagaatatagatttgagtccagaa
caaattgaaaaagtatatgaagttctagagacaatgggtattgatattattggagatatt
caggatatagaagttgaagaagaggaattagatttatctgtacctgaaggaatagctata
gatgatcctgttagaatgtatcttaaagagattggtaaagtaccattattggctccagat
gaagaaattaatcttgctcagagaatagaagatggagatcaggtggcaaagaaaaaactg
gcagaagcaaatttgagacttgtggtaagtatagcaaagagatatgtgggcaggggaatg
caatttttggatttaatacaggaaggaaatcttggacttataaaggctgtagaaaaattt
gactatagaaaggggtataaattcagtacttatgccacttggtggattaggcaggccatt
acaagagctatagcggatcaggccagaaccataagaataccagtgcacatggtagaaact
attaataagttaataagagtttcaagacaattacttcaagagctgggtagagaacctcag
gcagaagaaattgctaagattatggaaatgcctgtggataaagtaagagagataatgaaa
atagctcaggaaccagtttcacttgaaacccctataggtgaagaagaagatagccatctt
ggcgattttattccagatgatgaggcaccggcaccagcagaagcagcagcttttacaatg
cttaaagaacagcttataaatgtacttgatacattaactcctcgtgaagaaaaagtactt
agattgagatttggattggatgacggaagagctagaactcttgaagaagttggaaaagaa
ttcaatgttacaagagagaggatacgacaaatagaagcaaaggctcttagaaagttaaga
catccaagcagaagtaaaaagttgaaagattatttggattaa
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