Clostridium pasteurianum DSM 525 = ATCC 6013: CPAST_c36410
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Entry
CPAST_c36410 CDS
T03811
Symbol
truA1
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cpae
Clostridium pasteurianum DSM 525 = ATCC 6013
Brite
KEGG Orthology (KO) [BR:
cpae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpae03016
]
CPAST_c36410 (truA1)
Enzymes [BR:
cpae01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CPAST_c36410 (truA1)
Transfer RNA biogenesis [BR:
cpae03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CPAST_c36410 (truA1)
Prokaryotic type
CPAST_c36410 (truA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AJA49697
UniProt:
A0A0H3J8Y0
LinkDB
All DBs
Position
complement(3918492..3919226)
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AA seq
244 aa
AA seq
DB search
MKNVKLIIEYDGTNYSGWQIQKNVITVEQVIEKSLNDITGENIKIIGSSRTDAGVHAKGF
VGNFFTESKIPCDRFRNILNGKLPKDIVILNSEEVQLSFNSRFDSRGKTYSYTILSTPQR
PAIGRNYVYHFRKNLDLGLILEASKEFIGTHDFAAFKSSGGNTKTTVRTISNLEIIKRDD
YIIFTITGDGFLYNMVRIIIGTLIEVGLEKISPKNIKTILLSRNRNMAGPCVPPGGLCLE
KVYY
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgttaaacttattattgaatatgatggaactaattactcaggatggcaaata
caaaaaaatgttataactgttgagcaagtcattgaaaaaagtctaaatgatataactggt
gaaaatataaaaattataggatccagtaggactgatgccggggttcatgcaaaaggtttt
gtggggaatttttttactgagagtaaaataccttgtgatagatttaggaatattttaaat
ggcaaattacctaaagacattgtaattttaaattcagaagaagtacaattgagttttaat
tcaagatttgatagtagaggtaaaacatatagctatactattttaagtacaccacagaga
ccagcaataggaagaaattatgtatatcattttagaaaaaatttagatctaggattaata
ctagaagcaagtaaggagtttattggaactcatgattttgcggcttttaagagtagcggt
ggaaatacaaaaactacagtaagaacaataagtaatttagaaattataaaaagagatgac
tacataatatttactataacgggtgatggatttttatataatatggttaggataattata
ggtactttaattgaagtcggtttggagaaaattagtcctaaaaatattaaaactatactt
ttgtcaaggaatagaaatatggctggaccatgtgttccgcctgggggcttatgcttagaa
aaggtatattattaa
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