Clostridium pasteurianum DSM 525 = ATCC 6013: CPAST_c36460
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Entry
CPAST_c36460 CDS
T03811
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cpae
Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CPAST_c36460 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpae03021
]
CPAST_c36460 (rpoA)
03400 DNA repair and recombination proteins [BR:
cpae03400
]
CPAST_c36460 (rpoA)
Enzymes [BR:
cpae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CPAST_c36460 (rpoA)
Transcription machinery [BR:
cpae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CPAST_c36460 (rpoA)
DNA repair and recombination proteins [BR:
cpae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CPAST_c36460 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AJA49702
UniProt:
A0A0H3J8Y4
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All DBs
Position
complement(3922440..3923387)
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AA seq
315 aa
AA seq
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MLEIEKPKIECVESTEDGSYGKFVIEPLERGYGITLGNSLRRILLSSLPGVAANSIKIEG
VLHEFSTIKGVKEDVTEIILNIKSLALKMSGDGPKVIYIDSEGNGEVTAGDIKTDEDVEV
VNKDLHIATLDNDGKLYMEIEVNRGRGYVTQNRNKREDMPIGTIPVDSIYTPIKRVNFSV
ENTRVGQITDYDKLTIEIWTNGTIRPEEAISLSAKILIEHFKLFMTLTDHADDVEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTERSMEDMMKVRNLGKKSLEEVE
QKLEALELSLKQSEE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaatagaaaagccaaaaattgaatgtgtagaatctactgaggatggttcttat
ggtaagtttgttattgaacctttggaaagaggttatggaattactttaggaaattccctc
agaagaattttactctcatcactacctggagttgcagccaattctattaaaatagaaggt
gtacttcatgaattttcaactataaaaggtgttaaagaagacgtcacagaaataatactt
aacattaaatctttagctttgaagatgagtggtgatggtcctaaagttatttatattgat
tcagaaggaaatggagaagttactgctggagatataaaaacagatgaagatgtagaggtt
gttaataaagatttacatatagctactcttgataatgacggaaaattatatatggaaatt
gaagttaacagaggcaggggatatgttactcaaaatagaaataaacgagaagatatgcct
ataggaactattccagtggattcaatatatacaccaataaagagagttaattttagtgtt
gaaaatacaagagtaggtcagataactgactatgataagctaactattgaaatatggact
aatggaactataagacctgaagaagctataagcttatcagctaaaatacttattgaacat
tttaaattatttatgactttaacagatcatgcagatgatgttgaaattatggtagaaaaa
gaagaagacaaaaaagaaaaagtacttgaaatgaccatagaagaactggatctttcagtg
aggagctataactgtttaaagagagctggtattaatacggttcaagaattaacagaaaga
tctatggaagatatgatgaaggtaagaaatttaggtaaaaaatcacttgaggaagttgaa
caaaagcttgaagctttggaactatcattaaaacaaagtgaagagtaa
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