Clostridium pasteurianum DSM 525 = ATCC 6013: CPAST_c37410
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Entry
CPAST_c37410 CDS
T03811
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
cpae
Clostridium pasteurianum DSM 525 = ATCC 6013
Brite
KEGG Orthology (KO) [BR:
cpae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpae03032
]
CPAST_c37410 (hup)
03036 Chromosome and associated proteins [BR:
cpae03036
]
CPAST_c37410 (hup)
03400 DNA repair and recombination proteins [BR:
cpae03400
]
CPAST_c37410 (hup)
DNA replication proteins [BR:
cpae03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CPAST_c37410 (hup)
Chromosome and associated proteins [BR:
cpae03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CPAST_c37410 (hup)
DNA repair and recombination proteins [BR:
cpae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CPAST_c37410 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF4656
Peptidase_C80
AARP2CN
Motif
Other DBs
NCBI-ProteinID:
AJA49780
UniProt:
A0A0H3JBI3
LinkDB
All DBs
Position
complement(3997477..3997815)
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AA seq
112 aa
AA seq
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MIYEEYAIKLTYILNFKEVTKVNKAELITSIAEKSNLTKKDAEIALKGFIESIEEALEKG
EKVQLVGFGTFETRERAERKGRNPRSKEEIIIPASTVPVFKAGKEFKDRVNK
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
gtgatttatgaagaatatgctattaagttaacgtatattcttaattttaaggaggtaaca
aaagtgaacaaagcagaattaattacaagtatagctgaaaaaagtaatttaacaaaaaaa
gatgcagaaatagctctaaaaggatttatagaaagtatcgaagaagctcttgaaaaaggt
gaaaaagttcaattagtaggatttggtacatttgaaacaagagaaagggctgaaagaaaa
gggagaaatccgagatctaaagaagaaataattatacctgcttcaacagtaccagtattt
aaagcagggaaagaatttaaggacagagtaaataaataa
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