Caminibacter pacificus: C6V80_01245
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Entry
C6V80_01245 CDS
T06023
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cpaf
Caminibacter pacificus
Pathway
cpaf03030
DNA replication
cpaf03430
Mismatch repair
cpaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C6V80_01245
03430 Mismatch repair
C6V80_01245
03440 Homologous recombination
C6V80_01245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpaf03032
]
C6V80_01245
03400 DNA repair and recombination proteins [BR:
cpaf03400
]
C6V80_01245
Enzymes [BR:
cpaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C6V80_01245
DNA replication proteins [BR:
cpaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C6V80_01245
DNA repair and recombination proteins [BR:
cpaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C6V80_01245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
AAA_14
AAA_22
AAA_30
RCF1-5-like_lid
AAA_5
AAA_assoc_2
ResIII
TsaE
DNA_pol3_gamma3
FtsA_C
AAA_19
Rad17
AAA_16
TIP49
DEAD
AAA_24
AAA_7
AAA_18
Zeta_toxin
PIF1
Clathrin
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QCI27635
LinkDB
All DBs
Position
complement(231092..232579)
Genome browser
AA seq
495 aa
AA seq
DB search
MVLALKYRPKRFEEIIGQDAIVKTLTNALDKNRLAHAYLFSGLRGAGKTTTARIFSKALQ
CEKGPTSSPCETCENCIMANENRHIDIIEMDAASNRKIEDIRELIEHTKYKPTLGKYKIF
IIDEVHMLTNEAFNALLKTLEEPPEYVKFIMATTDPLKLPATILSRVQHFRFNKIPESTI
ESYLQRVLTQENVEFEDEALRLIVKSAKGSVRDSLTLLDQAIAYCGGKIELDKVVEMLGV
INPEIISQIFKAIIENDKEKLKEIIKEIKDYDIESVLDEIILFLKDALFNGGLPLITVQR
FFNIISDSRELIKYNSDNEFILSLMFFRMVEATKPHKIDDLIKNLEQKIDIDSYKPKDLP
NITKPDPEELFKTLIAKIKEKDYDLGLCFETSVKFISFENNELKWESCPDIECKNMLRRF
FSPVIRPLINEIFGLNVKIIPQKCPESPKPQPQPQQPQTQKKTNSPLNDKSEQVISKVRE
VFGSDVKITKILHKS
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtggtattagctctcaaatacagacccaaacgttttgaagaaatcatcggacaagacgca
atagtcaaaactcttacaaacgcacttgacaaaaacagacttgctcacgcttatcttttc
tcaggcctaagaggtgcgggaaaaaccacaaccgcaaggatattctcaaaagcactacaa
tgcgaaaaagggcctacttccagcccttgcgaaacgtgtgaaaattgtattatggcaaat
gagaaccgccatatcgatattattgaaatggacgcggcaagtaatagaaaaatcgaagat
attagagagcttatcgaacacaccaaatataaaccgacactcggaaaatacaaaatcttc
ataatagacgaagttcatatgctaacgaacgaagcctttaacgctcttttaaagacatta
gaagagccgcctgaatatgtaaagtttattatggcaacgacagaccctcttaaattgccc
gcaacaatacttagtagagttcagcattttagattcaacaaaatcccggaaagtactatt
gagagttatcttcaaagagtattaactcaagaaaacgtagaatttgaagacgaagcgcta
agactaatcgtaaaatcagcaaaaggtagtgttagagattctttaactctattagaccaa
gctatagcttattgcggaggcaaaatcgagcttgacaaagtcgtagaaatgctcggagtt
atcaatccggaaataatctcgcaaattttcaaagccataatagaaaacgacaaagaaaaa
ctaaaagaaatcataaaagagataaaagactacgatatcgaatccgttcttgatgaaatc
atattatttttaaaagacgctctttttaacggaggcctgcctcttattaccgttcagaga
ttttttaatatcataagcgactcaagagaactcataaaatacaacagcgacaacgaattt
atattatcgctgatgttttttagaatggtagaggcgacaaaacctcataagattgacgat
ttaattaaaaatttagaacaaaaaatagacatcgactcttataaaccgaaagatttgcca
aacattacaaaacctgatcctgaagagctctttaaaacacttattgcaaaaattaaagaa
aaagattacgacttgggactttgctttgagacaagcgtaaaatttatatcttttgaaaac
aacgaacttaaatgggaaagctgtccggatatcgaatgtaaaaatatgctaagaagattt
ttttcacctgtaataagacctctaatcaacgaaattttcggtctaaacgtaaaaataatt
cctcaaaaatgcccggaatctccaaaacctcagccgcaaccacaacaaccccaaactcaa
aaaaaaacaaattcaccacttaatgataaatccgaacaagttatcagcaaagtaagagaa
gttttcggaagcgacgtaaaaatcacaaaaatcctacacaaaagctaa
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