Caminibacter pacificus: C6V80_01280
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Entry
C6V80_01280 CDS
T06023
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cpaf
Caminibacter pacificus
Pathway
cpaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C6V80_01280 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpaf03019
]
C6V80_01280 (groL)
03110 Chaperones and folding catalysts [BR:
cpaf03110
]
C6V80_01280 (groL)
03029 Mitochondrial biogenesis [BR:
cpaf03029
]
C6V80_01280 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpaf04147
]
C6V80_01280 (groL)
Enzymes [BR:
cpaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
C6V80_01280 (groL)
Messenger RNA biogenesis [BR:
cpaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
C6V80_01280 (groL)
Chaperones and folding catalysts [BR:
cpaf03110
]
Heat shock proteins
HSP60 / Chaperonin
C6V80_01280 (groL)
Mitochondrial biogenesis [BR:
cpaf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
C6V80_01280 (groL)
Exosome [BR:
cpaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
C6V80_01280 (groL)
Exosomal proteins of other body fluids (saliva and urine)
C6V80_01280 (groL)
Exosomal proteins of breast cancer cells
C6V80_01280 (groL)
Exosomal proteins of colorectal cancer cells
C6V80_01280 (groL)
Exosomal proteins of bladder cancer cells
C6V80_01280 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
GPP34
DUF4020
Motif
Other DBs
NCBI-ProteinID:
QCI27641
LinkDB
All DBs
Position
236586..238223
Genome browser
AA seq
545 aa
AA seq
DB search
MAKEIVYSDVARNELLAGVEKLADAVRVTMGPKGRNVLLQRSFGAPHITKDGVSVAKEIE
LKHPVENMGAQLVKEVASKTADEAGDGTTTATVLAHAIFKEGLKYITAGANPIAVKRGMD
KAAQAIIEELKKMSKPVENKEQIAQVATISANNDRKIGELIAEAMDKVGKDGVITVEEGK
SLEDELEVVEGMQFDRGYLSPYFVTDTEKMVAEYNDAYILLYDKKISSMKDLLPLLEQLV
QQGGNKPLLIIAEDVEGEALATLVVNKLRGVLNVVAVKAPGFGDRRKAMLQDIAILTGGQ
VISEELGRTLESATLADLGQAGRVVVDKENTTIVDGKGDKAAIEARINQIKKEIEETTSD
YDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAAI
LKAAKKAEVESVDPDEQIGIDIIKRAVKAPIKQIASNAGYEPGVVALTVEEADDNTGFNA
ATGEYVNMFEAGIIDPTKVERIALQNAVSVSGLLLTTEAAVTEEPKDEKAPAAPDMGGMG
GMGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaatcgtatatagtgatgttgcaagaaacgaattattagcaggtgttgaa
aaacttgccgatgcagttagagttacaatgggaccgaaaggtagaaacgttctacttcaa
agaagtttcggagcacctcatattacaaaagacggtgtatccgtagcaaaagaaatcgaa
cttaaacatcctgtagaaaatatgggtgcgcaacttgtaaaagaagttgcgagcaaaact
gctgatgaagcgggggacggtacaactactgcgacagttttagcacatgcaatctttaaa
gaaggtctaaaatacattactgccggtgcaaatccgatagcggtaaaaagaggtatggat
aaagcggctcaagctattatcgaagaacttaaaaaaatgagcaaacctgttgaaaacaaa
gaacaaatcgctcaagttgcgacaatttcagcaaacaacgatagaaaaatcggtgaatta
atcgctgaagcaatggataaagtaggaaaagacggagttattactgtagaagaaggtaaa
tctcttgaagacgaacttgaagtggttgaaggtatgcaattcgatagaggatatctatca
ccatacttcgtaactgatactgaaaaaatggtagctgaatacaatgacgcatacatttta
ctatatgataaaaaaatcagcagcatgaaagatttattaccgttacttgaacaattagta
caacaaggcggaaataaaccgttattaatcattgctgaagacgtagaaggtgaagctctt
gcaacacttgtagttaacaaactaagaggagtattaaacgtagttgctgttaaagcgcct
ggatttggtgacagaagaaaagctatgcttcaagatatcgcaatcttaacaggcggacaa
gtgatttctgaagagcttggtagaacacttgaaagcgcgacattagcagacctcggacaa
gcaggaagagttgtagttgataaagaaaacactacaatcgtagacggaaaaggtgataaa
gctgctattgaagcgagaattaaccaaatcaaaaaagaaattgaagaaacaacaagtgat
tacgacagagaaaaattacaagaaagacttgcaaaacttagcggtggtgtagctgttatt
aaagtaggtgcggctactgaaactgaaatgaaagagaaaaaagacagagttgacgacgct
ctaagcgcaactaaagcggctgttgaagaaggtatcgtaatcggtggtggtgcggctatt
ctgaaagctgctaaaaaagcggaagtagaatctgtagaccctgatgaacaaatcggaatc
gatatcatcaaaagagctgtaaaagctcctatcaaacaaatcgcaagcaacgcgggatat
gaaccaggagttgtagcgttaactgtagaagaagctgatgataatacaggattcaacgca
gcaacaggtgaatacgtaaatatgtttgaagcgggtatcatcgaccctacaaaagttgaa
agaatcgctcttcaaaacgcagtgagcgtttcaggattgcttctaacaactgaagcggct
gtaacagaagagccaaaagacgaaaaagcccctgcagctcctgatatgggaggaatgggc
ggaatgggaatgatgtaa
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