Caminibacter pacificus: C6V80_02245
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Entry
C6V80_02245 CDS
T06023
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cpaf
Caminibacter pacificus
Brite
KEGG Orthology (KO) [BR:
cpaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpaf03016
]
C6V80_02245 (truB)
Enzymes [BR:
cpaf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C6V80_02245 (truB)
Transfer RNA biogenesis [BR:
cpaf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C6V80_02245 (truB)
Prokaryotic type
C6V80_02245 (truB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
NrS1-1_pol-like_head
DUF3744
Adeno_PV
Motif
Other DBs
NCBI-ProteinID:
QCI27826
UniProt:
A0AAJ4RCU8
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All DBs
Position
complement(404566..405393)
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AA seq
275 aa
AA seq
DB search
MQDCQNRLFVARKPMFISSNKFLNTLKKKYGIKKMGFSGTLDPFACGNLIIASGQYTKLF
RFLDKTPKTYIATLMLGAYSPSLDIEKIETIKSVEKIDEEKIKEVLNSFLGKQKQLPPKY
SAKKINGVRAYKLDDEKDFLDKEIEIEIFDIKLINYSHPFITFQASVSEGTFIRTLGYDI
AKKLGFEGALTYLERTKEGKFQYECEKPLNPLEFLKIPQNFYLNDPKNLILGKKLDIKDF
EIQKSGIYYVKYDNYFAIIEIGENVKYILNRIGLC
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcaggattgtcaaaacaggctttttgtagcgagaaagccgatgtttataagttcaaac
aaatttttaaacactctaaagaaaaaatacggaattaaaaaaatgggattttccggtacc
cttgacccatttgcttgcggaaatttgattattgcaagcggtcaatacaccaaacttttc
agatttttagacaaaactccgaaaacttacatagcaacattgatgttgggagcttattct
ccgagtcttgatatagaaaaaatagaaacgattaaaagcgtagaaaaaattgacgaagaa
aaaataaaagaggttttaaactcttttttaggaaaacaaaaacaacttcctcccaaatac
agcgcaaaaaaaataaacggcgttagagcatacaaactcgacgatgaaaaggacttttta
gataaagaaatagaaatagagatttttgatatcaaacttataaactattctcaccctttt
ataacatttcaagcaagtgtaagtgaaggtacgtttataagaactttgggatatgatatt
gctaaaaagttgggttttgagggagctttaacttatcttgaaagaacaaaagaaggaaaa
tttcaatacgagtgcgaaaaaccattaaaccctcttgaatttttaaaaatacctcaaaat
ttttatttaaacgaccctaaaaatttgattctgggaaaaaaacttgatataaaagatttc
gaaattcaaaaaagcggaatttattatgtaaaatatgataactattttgctattatcgaa
atcggggagaatgtaaaatatattttaaataggattgggctatgttag
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