Caminibacter pacificus: C6V80_02250
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Entry
C6V80_02250 CDS
T06023
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpaf
Caminibacter pacificus
Pathway
cpaf03420
Nucleotide excision repair
cpaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C6V80_02250
03430 Mismatch repair
C6V80_02250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpaf03400
]
C6V80_02250
Enzymes [BR:
cpaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C6V80_02250
DNA repair and recombination proteins [BR:
cpaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C6V80_02250
MMR (mismatch excision repair)
Other MMR factors
C6V80_02250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
eIF3_p135
NopRA1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QDD68095
LinkDB
All DBs
Position
complement(405720..407711)
Genome browser
AA seq
663 aa
AA seq
DB search
MKFLDELNDVQKEAATHIDGALLILAGAGSGKTKTITTRLAYLLSLGIDPANTLTLTFTN
KAANEMRERALSLLEGQNIPHPPLLSTFHKFGLMFLKLYIHLINRDNNFVIIDSDDQRKI
IKQISSDLPPNFISKEISKYKNSFLTPDEVYALATDSVYKNLAHIYEKYQNYLLENNLVD
FDDLLLLTYKILNENDDLADEISDKYQYIMVDEYQDTNEIQLLLLKRLCKNHNNICVVGD
DDQSIYGFRGANHKNILDFEKDFNAKVIKLEINYRSTNQILNAANNLISFNKNRYGKKLI
SARGDGKDIEILRNYNEIAEAEMIAKKIRDLINQGVDPKEIAVLYRINALSRSIEDGLRN
YGIPYKLVGGMKFYEREEIKDLISYLRLLVNPHDDYSFKRVVNKPRRGIGKATIAKIEEA
KGDKSFIEYIKENDLSIISKKAAKTLKDFVNTLELLSKMSLDELPENLEEIFELSKSYKD
EDKARNIEEFYGMMRERSDLNIREFLNELSLETDQDKITMDMINVMTIHASKGLEFDHLF
VIGMEEGFFPLNDADIEEERRLAYVAITRARKDLTLSYVESRYIHGKRSPVNKSRFLTEA
GLIKGERVELKESSAIKTGSLVKHKVFGTGRVLGINKAGNKTKLKIDFGGSVREILSDFV
EKV
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttttagacgaattaaatgatgtccaaaaagaagccgcaactcatatcgacggc
gctcttttgattttagcaggagccggaagcggtaaaacaaaaactattacgacaagactc
gcttatcttttatcgttaggaatagacccggcaaacaccttgacactcactttcaccaac
aaagcggcaaacgaaatgagagagagggctcttagtctgctcgaagggcaaaacatccct
caccctcctttactatcgacgtttcacaaattcggtcttatgtttttaaaactatacatt
catcttataaatagagacaacaatttcgtaatcatcgacagcgacgaccaaagaaaaata
ataaaacaaatctcaagcgacttgcctcctaattttatctcaaaagagattagcaaatat
aaaaattcgtttttaactcctgatgaagtttacgctttagcaacggatagcgtatataaa
aatttggctcatatttacgaaaaataccaaaactacctgcttgaaaacaatctcgtagat
tttgacgaccttttgttgctaacatacaaaattttaaacgaaaatgacgacttggcggat
gagataagcgacaaataccaatacattatggtcgatgaatatcaagataccaacgaaatt
caattactgcttttaaaaagattatgtaaaaatcacaacaacatctgcgtcgtaggtgac
gatgaccaatcgatatacggctttagaggcgcaaaccacaaaaacatactcgatttcgaa
aaagacttcaatgcaaaagtgataaaacttgaaatcaactaccgctcgacaaatcaaata
ctcaacgccgcaaacaacctgataagtttcaacaaaaacagatacggcaaaaaattaatc
tccgcaagaggcgacggaaaagatatagaaattttgagaaactacaacgaaatcgccgaa
gcggaaatgatagccaaaaaaatcagagatttgataaaccaaggagtagacccgaaagaa
atcgcagtactttacagaataaacgccctttcccgctctattgaagacggacttagaaat
tacggcataccttacaagctcgtcggcggtatgaaattctacgaaagagaagagataaaa
gacttaattagctatttaagacttcttgttaatcctcacgacgattactcttttaaaaga
gtcgtaaataaacccagaagaggaataggaaaagcgactatcgcaaaaatagaagaagca
aaaggagataaaagttttatcgaatacataaaagaaaacgacctctcaattattagcaaa
aaagctgcaaaaacattaaaagatttcgtaaatactcttgaactattaagcaaaatgtca
ttggacgaactgcctgaaaatttagaagagatattcgaactatcaaaaagctacaaagat
gaagacaaagcaagaaatatcgaagagttttacggaatgatgagagaaagaagcgatttg
aatatcagagaatttctaaacgagctttcattagaaacggaccaagataaaatcactatg
gatatgataaacgttatgacgattcacgcaagcaaaggtcttgaattcgatcatcttttc
gttatcggaatggaagaagggtttttccctctaaacgacgccgatatcgaagaagaaaga
cgccttgcttatgtagctatcacaagagcgagaaaagatttgactctttcatatgtcgag
agcagatatattcacgggaaaagaagtcccgttaacaaaagcagatttttaactgaagcc
ggattgataaaaggcgaaagagtggagcttaaagaatcaagcgcaataaaaacaggttct
cttgtcaaacacaaagttttcggaacgggaagagtacttggtatcaacaaagccggaaat
aaaacaaaactaaaaatagatttcggaggaagtgttagagagatacttagcgattttgtg
gagaaagtgtga
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