Caminibacter pacificus: C6V80_02965
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Entry
C6V80_02965 CDS
T06023
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
cpaf
Caminibacter pacificus
Pathway
cpaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C6V80_02965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpaf03400
]
C6V80_02965
DNA repair and recombination proteins [BR:
cpaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
C6V80_02965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smr
MutS_V
MSSS
CCDC93_CC
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QCI27961
LinkDB
All DBs
Position
complement(537646..539814)
Genome browser
AA seq
722 aa
AA seq
DB search
MVKKLDLSDYIAKLSSLFAREKEYFLQGDIRKNYEYLNKLSNKDFKSPPSVKNLDTEIMH
LKKFGTLKHDQIFEFVKIINYFKYLKSRNWSDLAEWFDKIKIPEDIENLIKHYNEKGEVI
GFEDIDLINEKIKEVKSSIRQQLYKYLNSKKLEPFLVDRQIHLQSGEECLLVRGGYNKVL
DAEILGRSQGGFFYVFPRGIEKLKKQLDELESKKEEILYEIAKNFSETLRKWVKFLEFIN
NEFDKFDALQARVFMAKNENLEFIMPTFKTKKMYLRDFCHPALHDCKPVTLEWDKQVLII
TGVNAGGKTMLLKSILSAAFMSKYLLPMKIRENSVIPHFKEIVPIIDDPQNVKNDISTFA
GRIKEFKEVFAKENYLIGVDEIELGTDANEAASLFKVIIEELMKKNRIVITTHHKRLATL
LAQNEEVELLAAIYDEKKEKPTYEFIKGTIGKSYAFETAKRYGIPINIIQKARQEYSEDL
EKLDVLIEKSAKLEFEQKQKIKELQSELENVKLLKESLIRQKEEFNEKIQKEREKLLREY
NAAIKAAKEAIKAKDTREAHRKLNEAHKLRSKIKIQKEEINREFKIGDNVKYGNSVGTIV
EIKGKNALVEFDGKKLLISKSALKPYLAPVKKESKIYKPKPQKVDIKLDLHGMRLEEALE
KTEEYLNNAALAGLEEVWIYHGMGKGILAKGITELLKNHPLVKEFHDAPPHMGGYGAKIV
KL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaaaattagatttaagcgattatattgcaaaactctcttctcttttcgcaaga
gaaaaagagtattttttgcaaggggatataagaaaaaattacgaatatttaaataaacta
tcaaataaagatttcaaatcacctccaagcgtcaaaaatttagatacggaaattatgcac
ctaaaaaaattcggaacactaaaacacgaccagattttcgaattcgtaaaaataatcaac
tacttcaaatatctaaaaagcagaaactggtccgatttggcggagtggttcgataagata
aaaatacctgaagatatcgaaaatttgattaaacattataacgaaaaaggcgaagttatc
ggctttgaagatatagaccttataaacgaaaaaataaaagaagtaaaatcctcaatcaga
cagcagttatataaatatctgaattcaaaaaaattagaaccttttttggttgatagacaa
atacatcttcaatcgggtgaagagtgtctgcttgtcagaggcggatacaataaagtcctt
gatgccgaaattttaggaagaagccaagggggatttttttacgtttttccaagaggaatc
gaaaaactaaaaaaacaacttgacgaacttgaaagtaaaaaagaggaaattctttacgaa
atagccaaaaatttcagcgaaactctaagaaaatgggttaagtttttggagtttataaat
aatgaattcgacaaattcgacgctcttcaggcaagagtttttatggcgaaaaacgaaaat
ctcgaatttattatgcctacatttaaaaccaaaaagatgtatttaagagatttttgtcat
ccggcacttcacgattgcaaacccgtaactcttgaatgggataagcaggttttgattatt
acgggtgtaaatgccggaggaaaaactatgcttttaaaatccattctcagtgcggcgttt
atgagtaaatatcttcttccgatgaaaataagagaaaattccgtaattcctcattttaag
gagatagtccctatcatagacgaccctcaaaacgtaaaaaacgacatctcaacctttgcc
gggagaattaaagaattcaaagaagttttcgcaaaagagaattatctcataggagtggat
gaaatcgagctcgggactgacgcaaacgaagctgcgagtctttttaaggtaataatcgaa
gaacttatgaaaaaaaatcgtatagttatcacgactcaccacaaaagacttgcaactctt
cttgctcaaaacgaagaagttgagcttttagcagcgatatacgacgaaaaaaaagaaaaa
ccgacatacgaattcataaaaggaactattggaaaaagttatgcgttcgaaacggcaaaa
agatatggaattcctattaatatcattcaaaaagcaagacaagaatactccgaagacctt
gaaaaattagacgttttaatcgaaaaatcggctaagttagaattcgaacaaaaacaaaaa
ataaaagaacttcaaagcgaacttgaaaacgtaaaattgttaaaagagtctctcataaga
caaaaagaggaattcaacgaaaaaattcaaaaagaaagagaaaaactacttcgcgaatac
aacgccgcaataaaagccgcaaaagaagctataaaagcaaaagacacgagagaagcacat
agaaaacttaacgaagctcataaattacgctcaaaaattaaaatacaaaaagaagaaata
aatagagaattcaaaatcggagataacgtaaaatacggcaacagcgtcgggaccattgta
gaaatcaaaggtaaaaacgctcttgtagaattcgacggcaaaaaacttcttatttcaaaa
tcggcactaaagccgtacttggcgcctgtaaaaaaagagagcaaaatctataaacctaaa
cctcaaaaagttgatattaaacttgacttacacggtatgagactagaagaagctcttgaa
aaaaccgaagaatacctaaacaacgcagcacttgccggacttgaagaagtatggatatat
cacggaatgggaaaaggaattttagccaaaggaataaccgaacttttaaaaaatcatcct
ttagtaaaagagtttcacgacgcgcctcctcatatgggaggatacggagcgaaaatcgta
aaactatga
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