Caminibacter pacificus: C6V80_03140
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Entry
C6V80_03140 CDS
T06023
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cpaf
Caminibacter pacificus
Pathway
cpaf00300
Lysine biosynthesis
cpaf00470
D-Amino acid metabolism
cpaf01100
Metabolic pathways
cpaf01110
Biosynthesis of secondary metabolites
cpaf01120
Microbial metabolism in diverse environments
cpaf01230
Biosynthesis of amino acids
Module
cpaf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cpaf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C6V80_03140 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C6V80_03140 (lysA)
Enzymes [BR:
cpaf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
C6V80_03140 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QCI27991
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All DBs
Position
569995..571200
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AA seq
401 aa
AA seq
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MIDFKYLAQKYDTPLYVYDFNHFTQQYNALKNAFKARKSIIAYAVKANSNLSVIRHFANL
GSGADCVSIGEVKRALLAGVDKYKIIFSGVGKRDDEIKEAIQKDILMINVESEAELKRVD
AIAKELGKVARISIRVNPNIDPKTHPYISTGLHENKFGVDIETAKGMYIFAKKSENLNPV
GIHFHIGSQLTELEPIREASEIVANLVRSLKAINVDIKFFDIGGGLGIKYKDEELIKPYD
YAQAILSTLSGLDVTIICEPGRFMVGNGGWFLTKVLYEKVNGDKRFVIVDGAMNDLIRPS
LYNAYHKIEVLNDNKEISKANIVGPICESGDFFAKDIDVPKTNPGDLIVIHSAGAYGFTM
ASNYNTRPRAAEVAIEDGNDRLIRRRETFEDLIACEVDYLV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgattgattttaaatatttagcacaaaaatacgatacgcctttatacgtttatgatttt
aatcattttacgcagcagtataacgcacttaaaaacgcttttaaagcaagaaaaagtatt
atcgcttatgcggtaaaagccaattccaatctttcggttatcagacattttgcaaatttg
ggaagcggtgctgattgcgttagtatcggagaggtaaaaagagcgcttttggcaggtgtt
gataaatacaaaataatattctcaggcgtgggaaaaagagacgatgaaataaaagaagcg
attcaaaaagatattttgatgataaacgtagagagtgaagcagagctaaaaagagttgat
gcaatcgctaaagaacttggaaaagtagcaagaatttctataagagtaaatcctaatatc
gacccgaaaactcacccttacatttcaaccggacttcacgaaaacaaattcggtgtggat
atcgaaactgctaaggggatgtatatttttgctaaaaaaagcgaaaatctaaatcctgtt
ggtattcattttcatatcggaagccagcttacggaactcgagcctataagagaagccagt
gagatagtcgctaatcttgttagaagtttaaaagctattaacgtcgatattaagtttttc
gatatcggtggcgggcttggtattaagtataaagacgaagagttgattaaaccttacgac
tacgctcaagcgattctctcgactcttagcggacttgacgtgactattatttgcgagccg
ggtaggtttatggtaggaaacggcggatggtttttgacaaaagtgctttacgagaaagta
aacggagataagagattcgttattgttgacggggctatgaacgatttgataagaccgagt
ctatataacgcatatcacaaaatcgaagttctaaacgacaataaagaaataagcaaagcc
aatatcgttggtccgatttgtgaaagcggagatttttttgcaaaagatatcgacgtacct
aaaacgaatccgggagatttgatagtgatacatagcgcaggtgcttacggatttacgatg
gcaagcaactataacacccgcccaagagccgcggaagttgctattgaagacggaaacgac
agattaatcagaagaagagaaacttttgaagatttaatcgcttgcgaagttgattatttg
gtataa
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