Caminibacter pacificus: C6V80_03595
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Entry
C6V80_03595 CDS
T06023
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cpaf
Caminibacter pacificus
Brite
KEGG Orthology (KO) [BR:
cpaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpaf03032
]
C6V80_03595 (gyrA)
03400 DNA repair and recombination proteins [BR:
cpaf03400
]
C6V80_03595 (gyrA)
Enzymes [BR:
cpaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C6V80_03595 (gyrA)
DNA replication proteins [BR:
cpaf03032
]
Prokaryotic type
DNA Topoisomerases
C6V80_03595 (gyrA)
DNA repair and recombination proteins [BR:
cpaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C6V80_03595 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QCI28070
LinkDB
All DBs
Position
654167..656620
Genome browser
AA seq
817 aa
AA seq
DB search
MQVIPVKIEETLAKSYLEYSMSVIVGRALPDVRDGLKPVHRRILYAMYKMGITSSSAYKK
SARIVGDVIGKYHPHGDSAVYEALVRMAQDFSMRMPLIDGQGNFGSIDGDNAAAMRYTEA
RLTKIAEELLKDIDKDTVDFVPNYDGTEKEPVVLPARFPNLLVNGSSGIAVGMATNIPPH
NLTELLDALIYMIDNKEATLDDILQFVKGPDFPTGGIIFGRSGIIEAYKTGRGSIKIRAK
HHIEHRGNREIIVIDELPYQVNKAKLIEKISDLVKDKIVEGISEIRDESDREGIRVVIEL
KKDAMSEIVLNNLYKHTQMQVSFGINMLAIIDKEPKLFNLMEILNTFIKFRKTVVIRRTI
YELEEAKRRAHILEGLLIALANIDEVVEIIKKSADAKEAKAKLMDRFSLSEVQAQAILDM
KLSRLTSLETEKLQKEYDELMEKIAYLTSILKEESVLNGVIKEEFIEIKNKYHSDRLTEI
EDDYDAIDIEDLIPNEDMVVTITHRGYVKRVPLKTYERQNRGGKGKKALTTYEDDFIEDF
YIAKAHDTLMIITDKGQLHWLKVYKIPEGSRTSKGKAIVNLINLDKDEKIQTIIKTSDFD
ENKSLAFFTKNGVVKRTNLSEFKNIRSTGVRAITIDENDELVTAKIVKPEDKELFIVTKK
GMAIRFPVDTVREMGRSARGVRGITFKIEGDEVVGALSLRDENQEILTVSEKGFGKRTEA
NAYRLTNRGGKGVIAMKLTNKTGDLVGVVATEKDHDLMLLTSKGKMIRTAIESISKTGKN
TQGVRIVKLDSDDKVVSVAKTPSEKSLEESELPLEND
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttattccggttaagattgaagagacgttagcgaaaagttatcttgaatattca
atgagtgtaattgtgggaagagcgcttcccgatgtaagagacggactaaaacccgttcac
agaagaattttatatgctatgtataaaatgggtatcacttcaagcagcgcttataaaaag
agtgcgagaatcgtcggggatgttataggtaaatatcaccctcacggagatagtgcggtt
tatgaagcgcttgtcagaatggcgcaggatttttcaatgagaatgccgctaatcgacggg
caaggaaacttcggtagtatcgacggcgacaacgcggcggcgatgagatatacggaagcc
agacttacaaaaatagccgaagaacttttaaaagatatcgataaagatacggtcgatttc
gtaccgaactacgacgggactgaaaaagagccggtcgtactaccagcgagatttccgaat
cttcttgtaaacggaagtagtggtattgccgtagggatggcgacaaacattcctccgcac
aacttaacggagctacttgatgcgttgatttatatgattgacaacaaagaagcgactctt
gatgatattttgcaattcgtaaaaggtcctgattttccgacaggcggtataattttcgga
agaagcggaataatcgaagcttataaaaccggaagaggaagtataaaaataagagcaaaa
caccatatcgaacatagaggaaacagagaaattatcgtaatagacgagcttccttatcaa
gttaataaagcgaagcttatcgaaaaaataagcgaccttgttaaagataaaattgttgaa
ggtatcagcgaaattagagacgagagtgatagagaaggtatcagggttgtaatagagctg
aaaaaagatgcgatgagcgaaatagtactcaataacctatacaaacacactcaaatgcaa
gtaagtttcggtatcaatatgcttgcgattatcgacaaagagcctaaacttttcaattta
atggagattttaaatacgtttatcaaattcagaaaaaccgtagttatcagaagaacgatt
tacgaacttgaagaggctaaaagaagagctcatattttagaagggttgttaatcgctctt
gcgaatattgatgaggttgtagagattattaaaaaatcggccgatgctaaagaagcaaaa
gcaaaactaatggatagattctcgctatctgaagtgcaagctcaagctattcttgatatg
aaactaagccgcttgacttcactcgaaactgaaaaacttcaaaaagagtatgacgaatta
atggaaaaaattgcatatttgacgtcaattttaaaagaagagagcgtactaaacggcgta
attaaagaagagtttatcgaaattaaaaacaaatatcattctgatagactcactgaaata
gaagacgactatgacgcgatagatatcgaagatttgattccgaatgaagatatggtcgta
acaattactcacagagggtatgtaaaaagagtgcctctcaaaacttacgaaagacaaaat
agaggcggaaaaggtaaaaaagcccttactacgtatgaagacgactttatcgaagatttt
tatattgcaaaagctcacgatacgcttatgattattacggataaaggtcagcttcattgg
ctaaaagtttataaaattcctgaaggtagcagaacgagcaagggtaaagcgattgtgaat
cttattaatcttgataaagatgaaaaaatccaaacaattattaaaacgagtgattttgat
gaaaacaaatctttagcgtttttcactaaaaacggagttgtaaaaagaacgaatttaagt
gaatttaaaaatataagaagtacgggagttagagctattactatcgatgaaaacgacgaa
ctcgtaacggctaaaatcgtaaaacctgaagataaagagctctttatcgtaacaaaaaaa
ggtatggcgataagatttcctgtggataccgtaagagagatgggaagaagtgcaagaggt
gttagaggtattacgtttaagatagaaggtgacgaggttgtaggagcgttgagtttaaga
gatgaaaatcaagaaatattaactgttagcgaaaaaggtttcgggaaaagaaccgaagct
aacgcatatcgtctcaccaatagaggcggtaaaggtgtaatagctatgaaacttaccaat
aaaacgggtgatttggtaggtgttgtggctactgaaaaagatcatgatttaatgcttttg
acaagcaaaggaaagatgataagaactgcgattgagagtatcagcaaaactggtaaaaac
actcaaggtgtcagaatagtaaaacttgatagtgacgataaagttgtaagcgtcgcaaaa
actccttctgaaaaatctcttgaagaatcggagcttcctttagaaaacgattaa
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