Caminibacter pacificus: C6V80_04690
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Entry
C6V80_04690 CDS
T06023
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpaf
Caminibacter pacificus
Pathway
cpaf03420
Nucleotide excision repair
cpaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C6V80_04690
03430 Mismatch repair
C6V80_04690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpaf03400
]
C6V80_04690
Enzymes [BR:
cpaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C6V80_04690
DNA repair and recombination proteins [BR:
cpaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C6V80_04690
MMR (mismatch excision repair)
Other MMR factors
C6V80_04690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QCI28278
LinkDB
All DBs
Position
867886..869904
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AA seq
672 aa
AA seq
DB search
MPLSKLNKEQLQAATAPLGHNLVIASAGTGKTSTIVGRIAYLLEEGIKPEEILLLTFTNK
AAAEMKERVARVIPSAKNIEAGTFHSVSYRWLKKLNKNITLKTPKDLKILFKSIYDKRDF
SRLGIEEKPYSANYLFDLYSLYLNSNAPSFEEWLLQKAPSHEPYALIYEDIFDEYENIKK
EHNLVDFNSLLIEMTNHLKNGIENPYREVLVDEYQDTNPLQNELIESVKQEGLFCVGDYD
QSIYAFNGADISIISTFDKRYENAKVFTLKKNYRSYGEILDIANRVIKNNPRIYPKTLEV
TRGYSGEYPKVLMYNDTFEEYRDIASRILTSTTKREEIAILFRNNSSADAIEAMLREKGI
ECKRKGGMSFFDSREIKITLDLLTFLINPKDIMAFIHIFEYAKGVGSAIAGEIFEALMTL
GDGDAIKGFLNPDTSKKVFTKKRTSYQLGLFDDFVTLGSVSKFVNLGFDEEFLANPILRH
PKLSIEGAEFLHNFYQFLKRIKRFKNPQAIFNELINSKIFDHIISNIAKERAKDKNGKID
EERYHEAKEKIKNKVKILGNLLKNYSDLERFLNAMVLGASEMSEGSGVNLLTVHASKGLE
FEEVYIVDMMEGRFPNIKLSKPAGGIEEERRLFYVAVTRAKDRLFFALAKNDRIKNITYE
PSRFLKEAGYKV
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
ttgccgttaagtaaattaaacaaagaacaactccaagccgcaaccgctcctttggggcat
aatttggtaattgcgagtgccgggacgggtaaaacttctacgattgtaggaagaatcgct
tatcttttagaagaaggtataaaacccgaagaaattttactccttacattcaccaataaa
gccgcagccgaaatgaaagagagagtcgcgcgtgtgattccaagcgcaaaaaatatagaa
gccggcacttttcactcggtaagctacagatggctaaaaaaactcaataaaaacataacc
ctaaaaactcccaaagatttgaaaattctttttaagtccatatacgacaaaagagatttt
tctcgtctcggaatagaagaaaaaccttatagtgccaattatctttttgatttgtactct
ttatacctaaactcaaacgctccctcttttgaagagtggctgttgcaaaaagctccctct
cacgagccgtatgcattaatatacgaagatattttcgacgagtatgaaaacataaaaaaa
gagcacaatttggtcgatttcaattctttattgatcgaaatgacaaaccacctaaaaaac
ggaatagaaaatccttatagagaagtgctcgtagatgaatatcaagataccaatccttta
caaaacgaacttattgagtcggtaaaacaagaggggcttttttgtgtgggtgattacgac
caaagtatttatgcttttaacggagcggatatttctattatttccacttttgataagaga
tacgaaaacgcaaaagtttttactttaaagaaaaactatagaagttacggcgaaattttg
gatattgcaaatagggttatcaaaaacaacccgagaatttatcccaaaacccttgaagtt
accagaggatacagcggtgagtatccgaaagttttgatgtataacgatacttttgaagag
tatagggatatcgcaagcaggattttaacaagcactacaaaaagagaagaaatagcaata
ctttttagaaacaactcttcagccgatgcgattgaagcgatgcttagagaaaaaggaata
gagtgcaaaagaaaaggcggtatgagtttttttgacagcagagaaattaaaataactctt
gatttgctcacttttctaataaacccgaaagatattatggcttttattcatattttcgaa
tacgctaaaggtgtcggaagtgcaattgccggcgaaatcttcgaagctctaatgacgctt
ggcgatggtgatgcgataaaggggtttttaaatcccgatacttcaaaaaaagtctttacc
aaaaaaagaacttcatatcagttggggctttttgatgatttcgttacgttagggagtgtg
agtaagttcgtaaatttggggtttgatgaagaatttttggcaaatccgatactaagacac
ccgaaactatctattgaaggtgccgaatttttacataatttttatcaattcttaaagaga
ataaagcgatttaaaaatcctcaagctatttttaacgaattaataaattcgaaaattttc
gatcatattatttcgaacatagcaaaagaacgcgcaaaagacaaaaacggaaaaatagac
gaagagagatatcacgaagcgaaagaaaaaataaaaaacaaagtcaaaattttaggcaat
cttttaaaaaattattcggatttggagaggtttttaaacgctatggtgcttggtgcgagc
gaaatgagtgaggggagcggagtgaacttattgaccgtacatgcaagcaaaggtcttgaa
ttcgaagaagtttatatcgtagatatgatggaggggcgttttccaaatatcaaactttca
aaacctgccggaggtatagaagaagagagaagacttttttacgtagcagtcacgcgtgca
aaagacaggctttttttcgcacttgcaaaaaacgacagaataaaaaatatcacttacgag
ccgagtaggtttttaaaagaagcggggtataaggtttaa
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