Caminibacter pacificus: C6V80_05460
Help
Entry
C6V80_05460 CDS
T06023
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cpaf
Caminibacter pacificus
Pathway
cpaf00260
Glycine, serine and threonine metabolism
cpaf00630
Glyoxylate and dicarboxylate metabolism
cpaf00670
One carbon pool by folate
cpaf00680
Methane metabolism
cpaf01100
Metabolic pathways
cpaf01110
Biosynthesis of secondary metabolites
cpaf01120
Microbial metabolism in diverse environments
cpaf01200
Carbon metabolism
cpaf01230
Biosynthesis of amino acids
cpaf01240
Biosynthesis of cofactors
cpaf04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cpaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
C6V80_05460
09102 Energy metabolism
00680 Methane metabolism
C6V80_05460
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C6V80_05460
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
C6V80_05460
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
C6V80_05460
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
C6V80_05460
Enzymes [BR:
cpaf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
C6V80_05460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QCI28422
LinkDB
All DBs
Position
complement(1014845..1016095)
Genome browser
AA seq
416 aa
AA seq
DB search
MSLLKNYDQDVYSILEKELERQTNHLEMIASENFTLPEVMEAMGSVFTNKYAEGYPGKRY
YGGCEYADMIEQLAIDRAKALFGCEYANVQPHSGSQANGAVYVALMKPLEKLLGMDLSNG
GHLTHGAKVNFSGKHYHSFSYGIDEKTGRIDYDRVRDIAKIVKPKMLVCGASAYPREIDF
AKFKEIADEVGAILMADVAHIAGLVVAGEHPNPFPHCDVVTTTTHKTLRGPRGGLILTNN
EEYAKKINSAIFPGIQGGPLVHVIAAKAVGFKMNLQDSWKDYAKQVKANARALAEVLLER
GYDLVSGGTDNHLVLVSFLNKEFSGKEAEEALGRAGITVNKNTVPGEKRSPFVTSGIRIG
SPALTARGMKEEEFRFIANKIADVLDDIYNLELQDKVAAELKELASKFVIYDRPTY
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagtttacttaaaaattacgatcaagacgtttattcaatcttggaaaaagagcttgag
agacaaacgaatcatcttgaaatgatcgcttctgaaaacttcactcttccggaagtaatg
gaagctatgggaagcgtttttacaaataaatacgctgaaggatatcccggaaaaagatat
tacggcggatgtgaatatgcggatatgatcgaacaacttgcaattgacagagcaaaagcg
cttttcggatgcgaatacgcaaacgttcaaccgcactcgggaagccaagcaaacggagcg
gtgtatgttgcgctgatgaaacctcttgaaaaacttttaggaatggacttaagcaacgga
ggacacttaactcacggtgcgaaagtaaacttttcaggtaaacattatcactctttctct
tacggaatcgacgaaaaaacaggtagaatcgattatgatagagtaagagatatcgctaaa
atagtaaaacctaaaatgttagtttgcggtgcgagtgcgtatccaagagaaatagatttt
gcaaaattcaaagaaattgctgatgaagtaggtgctattttaatggcggacgttgcacat
atcgcaggacttgtggttgctggtgagcatccgaatccattccctcattgtgacgttgtg
acaactacgactcacaaaactttaagaggaccaagaggaggacttattcttacaaataac
gaagaatacgctaaaaaaatcaacagcgcaatcttccctggaatccaaggaggaccgctt
gtacacgtaatcgcggcaaaagcggtaggatttaaaatgaatcttcaagatagctggaaa
gattatgcaaaacaagtaaaagcaaacgcaagagcgcttgctgaagtattgctggaaaga
ggttatgaccttgtaagcggcggtactgataatcaccttgtacttgtaagtttcttaaat
aaagaattcagcggtaaagaagccgaagaggcacttggaagagccggaattactgtaaat
aaaaacactgttcctggtgagaaaagaagtccttttgtaacttcgggtatcagaatcgga
agcccggctcttacggcaagaggtatgaaagaagaagagttcagatttatagcgaacaaa
atcgcagatgttcttgatgatatttataacctcgaacttcaagataaagttgcggcagaa
cttaaagaacttgcaagcaaattcgtaatttacgacagacctacttattaa
DBGET
integrated database retrieval system