Caminibacter pacificus: C6V80_06245
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Entry
C6V80_06245 CDS
T06023
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cpaf
Caminibacter pacificus
Brite
KEGG Orthology (KO) [BR:
cpaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpaf03400
]
C6V80_06245 (sbcD)
DNA repair and recombination proteins [BR:
cpaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C6V80_06245 (sbcD)
Archaeal homologous recombinant proteins
C6V80_06245 (sbcD)
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Motif
Pfam:
Metallophos
Metallophos_2
DNA_pol_E_B
SbcD_C
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
QCI28575
UniProt:
A0AAJ4RDE5
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All DBs
Position
complement(1173922..1174992)
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AA seq
356 aa
AA seq
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MKILHTSDLHIGHSVSGIDRGEEYERFFEWFEGVANEKKPDCVIVAGDVFDVYFPSNEAI
RQYYDFLLSLKNKTKKVIIIGGNHDSFKTLKAPKEILKYLDVVVVSGSEDDFCEFVEFDD
FVVVAISYLREGILKQYDDDIEKAIFKLYQEKLKEAKEKFPGKKLVTTAHFSVSGASLGD
SERDIYVGNLEFVSKDVFEGYDYVALGHIHKPQKITENIIYSGSPLALSFKETYQKNIVF
IEDDNVEFINVPKFREFASIKGSFKEVYEKISEMKDAFLEIVLDEIVDSEKLKLLKNGEN
HIVKITLPYVKEIKNFEVKKVTPEDIIKEIFDEKEIIEAFYEIKKEVEDEFGKVED
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacttcatacttcggatttgcatataggtcatagcgtaagcgggattgacaga
ggtgaggagtacgagcggttttttgagtggtttgagggtgtggcaaacgaaaaaaagccg
gattgtgtgatagtggcaggggatgtttttgacgtctattttccctcgaatgaagcgata
aggcaatattacgattttttgttgtcacttaaaaataagacgaaaaaagtgataattatc
ggaggaaatcacgattctttcaaaaccttaaaagctccaaaagagattttgaaatatctt
gatgttgtggttgtaagcgggtcggaggatgatttttgcgagtttgtcgaatttgatgat
tttgttgtggttgctatttcatatttaagagaggggatattaaaacaatatgatgatgat
atcgaaaaggctatttttaagctttatcaagagaaattaaaagaagcaaaagagaagttt
cccggtaaaaaattagtgacgaccgctcattttagcgtaagcggggcgagtcttggggac
agcgaaagagatatttatgtcggtaatttggaatttgtgagtaaggacgtatttgagggg
tatgattatgtagctctcgggcatattcacaaacctcaaaaaattaccgaaaatattatt
tatagcggctcgcctcttgctcttagttttaaagagacgtatcagaaaaatatcgtattt
atagaggatgataatgtcgagtttattaatgtacctaaatttagggagtttgcgagtatt
aagggaagttttaaagaggtgtatgaaaaaataagcgaaatgaaagatgcttttttggag
atagttttggacgagattgttgatagcgagaaattaaaacttctaaaaaacggcgaaaat
catattgtaaaaataacactgccgtatgtaaaagagataaaaaatttcgaagttaaaaaa
gtaactcccgaagatattataaaagagattttcgatgaaaaagagataatcgaagcgttt
tacgagataaaaaaggaagttgaagatgaatttggaaaagttgaggattaa
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