Caminibacter pacificus: C6V80_07425
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Entry
C6V80_07425 CDS
T06023
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cpaf
Caminibacter pacificus
Pathway
cpaf03030
DNA replication
cpaf03430
Mismatch repair
cpaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C6V80_07425 (dnaE)
03430 Mismatch repair
C6V80_07425 (dnaE)
03440 Homologous recombination
C6V80_07425 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpaf03032
]
C6V80_07425 (dnaE)
03400 DNA repair and recombination proteins [BR:
cpaf03400
]
C6V80_07425 (dnaE)
Enzymes [BR:
cpaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C6V80_07425 (dnaE)
DNA replication proteins [BR:
cpaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C6V80_07425 (dnaE)
DNA repair and recombination proteins [BR:
cpaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C6V80_07425 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QCI28802
UniProt:
A0AAJ4RBR4
LinkDB
All DBs
Position
1390768..1394196
Genome browser
AA seq
1142 aa
AA seq
DB search
MVPFHIHSDYSLLHSSLKIKDLVNKAKELGYKTLGISELDNMFSAIEFYETCKKNEIKPI
IGTDVLVDIEGNLHRMVLIAKNYQGYKNLMYLSSISYLYHQKGHQAIVPFEELVNHQEGV
AVVLPMTESLVGFHLNILNEENILKGAKGKAQAKYSALFLKEKINDLYLEIRRDSFKESL
IEKDLIEISEECDIPLIASSNIYYLEKLDYIYKDALECIESNKQFDDVHRDFDIGEYYLK
SPEEYENLFSDIPKALENNKKLFESIDLEIPLGNPTPPTFKFTKEYAQKEGLDIESDVEY
FEYKCWEGLNKRLQKIPKSEHETYKKRLEHEINIIKKMKFPGYMLIVWDFINYAKDPSRH
LRGDGNKIPVGPGRGSAAGSLVAYALEITNIDPIKYGLLFERFLNPERVSMPDIDVDFCQ
DRRDEVIEYVKEKYGSENVAQVVTFGSLLAKGVLRDVARIFGIDYSEADRFVKLIPDQLG
ITLQKAKELEPKIVEITQEDPLYNRLYSFGESLEGLKRNTGKHAAGVVISDEKLWNKSPL
YKQDEHDEFHTTQYSLNYLEPVDLIKFDFLGLKTLTVIDKAVKNIKLNKNEDVNIDDLSL
SDPKVFELIQSGKTLGLFQIESDGMQDLAKRLKPSTFEDVIAMLALYRPGPMDAGMLDDY
IERKHGRKPISYFYDEFEEVLKPILEPTYGVIVYQEQVMQIVQAIGGFSLGEADIIRRAM
GKKKADLMAKYAEEFAQRAQKQGFSYENAKALFNLIEKFAGYGFNKSHSAAYAMITYQTA
WLKKYYPTEFLSALLTYEADNTDKIAKYIDEAKSLGIEVLPPDVNKSNAEFTPMGEKILF
GLSAIKGVGSKAIESIVANRPFKDLEDFILRVDTSKVNKKVLEQLIKSGAMDCFGLSRKA
MLQNVENILEFKKRVEDKKNAINHEHSLFADMADESDDYREKLEIHDMPEFDTKTLLEGE
YETLGFYVSAHPLDPYKEKIEKLNYNLSSEVEEIIGQEALFVGKIEGMKVRISKKGNKFA
IANLMDYHGKIDIMIFERDLNKLQEYNLDEPLAIKAAVDKVGEFLRVTCRKVMSLEEAAN
EKAAVKDEITIIQREISENYEEDLMKIYNEISKNPGNKRAILQIKTPFGFTLKVETNLRT
SI
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
ttggttccttttcatattcatagcgactattcactgcttcactcttctttaaaaataaaa
gatttagtcaataaagcaaaagagctcggctacaagacgcttggaatcagcgaacttgac
aatatgttcagcgccatcgaattttatgaaacgtgcaaaaaaaacgaaataaaacctatt
ataggcacggacgttttggtagatatcgagggtaatcttcatagaatggtattaattgcc
aaaaactaccaaggctataaaaaccttatgtatctaagctctataagttatctttatcac
caaaaaggccaccaagctatagtaccttttgaagagcttgtcaatcaccaagaaggcgtg
gcggtagtgcttcctatgacggagagtttagtcgggtttcatcttaatattctaaacgaa
gaaaacattctaaaaggagccaaaggaaaagcccaagccaaatattcggcactattttta
aaagaaaaaatcaacgacttatatctcgaaataagacgcgacagttttaaagaatccctc
atcgaaaaagacctgatagaaataagcgaagagtgcgacattcccctaatcgcttcgagt
aatatctattatctcgaaaaactcgattatatctacaaagacgcccttgaatgtattgag
agcaacaaacaattcgacgacgttcacagagatttcgacataggagaatattatctaaaa
tctcccgaagaatacgaaaacctttttagcgacattcctaaggcacttgaaaacaacaaa
aagctttttgaaagtatagaccttgaaattcctcttggaaatcctactcctccgacattt
aaatttacaaaagagtacgcgcaaaaagagggtcttgatatagaaagcgacgtagaatat
ttcgaatacaaatgctgggaaggattaaacaaaagactccaaaaaatcccgaaatccgaa
cacgaaacttacaaaaaaagactcgagcacgaaataaatatcattaaaaaaatgaaattc
ccgggatatatgcttatagtttgggattttatcaactacgcaaaagacccgagccgccac
ctaagaggagacggaaacaaaatcccggtaggtccgggacggggaagtgctgccgggagt
ttggtggcgtatgctttagaaattactaatatcgaccctataaaatacggactacttttt
gagagatttttgaatcccgagagggtgagtatgcccgatatcgacgtcgatttttgtcag
gacagacgtgatgaggtgatagaatacgtaaaagaaaaatacggaagcgaaaacgtagcg
caagtggtgacattcggttctttgcttgcaaaaggtgttttaagagacgtagcgagaata
ttcggtatcgactactcagaagccgacagattcgtaaaacttatccccgaccaactcgga
attactctacaaaaagcaaaagaattggaaccgaaaatcgtagaaatcacacaagaagac
cctctttataacagactctattcattcggcgaatcgcttgaaggactaaaaagaaacaca
ggaaaacacgcagccggagtcgtaataagcgatgaaaaactctggaacaaatcccctcta
tacaaacaagacgagcacgacgaattccacacaactcaatattctctaaactaccttgaa
ccggtcgatttgattaaattcgactttttgggattaaaaacgctaacggttatagacaaa
gccgtaaaaaacataaaactaaataaaaacgaagacgttaatatcgacgacttatcactc
agcgaccctaaagttttcgagcttatccaaagcggaaaaacattaggtctattccaaata
gaatcggacggaatgcaggatttggcaaaaagattaaaaccatcaaccttcgaagacgta
attgcgatgctcgcactctaccgcccgggacctatggatgccggaatgcttgatgactac
atcgaaagaaaacacggaagaaaacctatcagttatttctacgacgaattcgaagaagtg
ctaaaacctattttggagccgacttacggggttatcgtttatcaagaacaggtaatgcag
atagttcaggcaatcgggggattctctcttggtgaagcggatatcataagacgggctatg
ggtaagaaaaaagccgatttgatggcgaaatacgcagaagaattcgctcaaagagcccaa
aaacaaggcttttcgtatgaaaacgcaaaagcactctttaacttaatcgagaaattcgcc
ggatacggattcaataaatcccactcggcggcttatgcaatgattacatatcaaacggca
tggctaaaaaaatactaccctaccgaatttttaagcgccttgcttacatacgaggccgac
aataccgacaaaatcgcaaaatatatagacgaagccaaatccttgggaatagaagtactt
ccgcctgacgttaataaatcaaacgctgaattcactcctatgggtgaaaagatacttttc
ggacttagcgcgattaaaggagtcggtagcaaagcaatagagagtatcgtagcaaacaga
ccttttaaagatttggaagattttattttaagagtagatacttcaaaagtaaacaaaaaa
gtattagaacaactcataaaatccggagctatggattgtttcggattatcgagaaaagcg
atgcttcaaaacgtggaaaatatattagaattcaaaaaacgcgtagaagacaaaaaaaac
gcaatcaaccacgagcactctttatttgctgatatggcggatgaaagtgatgattatcga
gaaaaattagaaattcacgatatgcctgaattcgatacgaaaacattgcttgagggcgaa
tacgaaacgttaggattttacgtctccgctcatcctcttgacccttacaaagaaaaaata
gaaaaactaaactacaacctctcaagcgaagttgaagaaattatcggacaagaagctctt
tttgtcggaaaaatagagggaatgaaagtaagaatctccaaaaaaggaaacaaattcgca
atagcgaatcttatggattatcacggcaaaatagatattatgattttcgaaagagactta
aacaaactccaagaatacaaccttgacgagcctttggcgataaaagctgcggtagataaa
gtcggagagtttttaagagtaacgtgtagaaaagttatgagtttggaagaagcggcaaac
gaaaaagccgcggtaaaagacgaaattacgataatacaaagagaaatttcagaaaattac
gaagaggatttgatgaaaatctataacgaaatctcaaaaaatccgggaaataaaagagcg
attttacaaataaaaacgccttttgggtttaccttaaaagtagaaaccaatctaagaacc
tctatttaa
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