Caminibacter pacificus: C6V80_08845
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Entry
C6V80_08845 CDS
T06023
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cpaf
Caminibacter pacificus
Pathway
cpaf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpaf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C6V80_08845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpaf03021
]
C6V80_08845
03400 DNA repair and recombination proteins [BR:
cpaf03400
]
C6V80_08845
Enzymes [BR:
cpaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C6V80_08845
Transcription machinery [BR:
cpaf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C6V80_08845
DNA repair and recombination proteins [BR:
cpaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C6V80_08845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
AF1548-like_C
Motif
Other DBs
NCBI-ProteinID:
QCI29061
UniProt:
A0AAJ4RBL6
LinkDB
All DBs
Position
complement(1651068..1652072)
Genome browser
AA seq
334 aa
AA seq
DB search
MNKIKTEILIPSEFSYEKKDNFARIEVYPFEAGFGVSVAHPIRRTLIAATTGYAPVALKI
EGVKHEFDSLKGMLEDVASFIINLKNIRFKIKDSEKDEVTVDYTFVGPKEIKGEDLINDD
VDVVTPDEYIATLNEEGELKLTLIIKKGMGFVAVENFRDQLPEGFIGLDAYFSPIKKVVY
NIENMLVEDDPNFEKVIFEVETDGQIDPIDAFKDAINNYLNQFSVFSKEFKLETKKVENV
ELPEEYNVLFEPIDTLNLRSRSFNALDRAGIRFIGELVLMGKEKIANIKNLGTKSLEEIF
EKLEEIGFSLSKPLPLDIKKAIEEKLSKLKETEQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaattaaaacagaaattttgattccaagtgaattttcatacgaaaaaaaggat
aacttcgcaagaatagaagtttatccttttgaagctggttttggagttagcgtagcccat
cctatcagaagaacacttatcgctgcgactacgggatatgctcccgttgcgctaaaaatt
gaaggtgttaagcacgaattcgacagcctaaaaggtatgcttgaagacgttgcgagtttt
attattaatcttaaaaatatcagattcaaaatcaaagattctgaaaaagacgaagtgact
gtagattacacgttcgtaggaccaaaagagattaaaggcgaagatttaatcaatgacgac
gttgatgtcgttacacctgatgagtatattgctactctaaacgaagagggtgagcttaaa
ttaactcttattattaaaaaaggtatgggattcgtagcggttgagaactttagagaccaa
cttcctgaaggtttcatcggacttgacgcatatttcagcccgattaaaaaagttgtatac
aatatcgaaaatatgcttgtagaagacgacccgaatttcgaaaaagtgatattcgaagtt
gaaactgacggacaaatcgaccctatcgacgcgtttaaagacgctattaataactatttg
aaccaattcagcgtattttctaaagaatttaaacttgaaactaaaaaagttgaaaacgta
gaattacctgaagaatataacgtattattcgagccaatcgatacgttgaatttaagaagc
agaagcttcaacgcccttgatagagccggaatcagatttatcggtgagcttgtattaatg
ggtaaagaaaaaattgctaatatcaaaaatctcggaactaaatctttagaagaaattttt
gaaaaacttgaagaaatcggatttagtttatctaagccgctacctcttgatattaaaaag
gcaattgaagagaaactttctaaattaaaggagactgagcaatga
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