Caminibacter pacificus: C6V80_09495 Help Entry C6V80_09495       CDS       T06023                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism cpaf  Caminibacter pacificus Pathway cpaf03018   RNA degradation Brite KEGG Orthology (KO) [BR:cpaf00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     C6V80_09495  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cpaf03019]     C6V80_09495 Messenger RNA biogenesis [BR:cpaf03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      C6V80_09495 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B_6 MupG_C T6SS_Tle1-like_cat Motif Other DBs NCBI-ProteinID:  QCI29177 UniProt:  A0AAJ4RB83 LinkDB All DBs Position complement(1765119..1767095) Genome browser AA seq 658 aa AA seqDB search MEKEKKEITLDEAIKNTIEENLKNDTEKNQNNNQNQNQEKSEKKEYKKNNYQKNNQKRTT YKSLQPQKNVNEKNFVWFKDLNKAFDENEKIHQARLSCFNKIDSNKKGWVRFTPLGGLDE IGGNCAVLETEDSAIIIDCGMSFPSEDMHGVDILIPDFSYLREIRHKIKGLIITHGHEDH IGAVPYLFKEMQFPIYGTSLPLAMIENKFKEHKMLQYKSYFRSVKKRHPIQIGDFKVEWI HMTHSIVDSSSLAIQTPIGTIIHTGDFKIDHTPIDGYPPDLHRLAHYGEKGVLALFSDST NSYKPGVTPSESVVGKTFEDLFMKTKGRVIMSTFSSNIHRVYQAIEKGIKFGRKVCIIGR SMEQNLNVAMDLGYIKLPRDIFIDPYEIGKYQDEEILIITTGSQGESMSALYRMAIDEHR HVKIKEGDQIIISAKAIPGNEPTVSQLINFLMKKGAKVAYHEFSEIHVSGHASQEEQKLM LRLVKPKYFFPVHGEYNHLMKHRETAISTGMDEKNIFVMEDGEQWEITPKKVRKVKNVKV GKIYIDNQINEQIETDVVIDRQKLANEGIIMIVAQVDKQNKKLIGRPRVTTFGIIADKED KAFAKEMEDLLINYIDHAKDYVYEKNRIFENELRNVIRKHVFRKTKKYPTIVPMVYFM NT seq 1977 nt NT seq  +upstreamnt  +downstreamnt atggaaaaagaaaaaaaagagataactcttgatgaagcaataaaaaatacaatagaagaa aatcttaaaaacgataccgaaaaaaatcaaaataacaatcaaaaccaaaatcaagaaaaa tctgagaaaaaagagtataaaaaaaataattatcaaaaaaacaaccaaaaaagaacgact tataaatctctccaacctcaaaaaaacgtaaatgaaaaaaatttcgtttggtttaaagac ttaaataaagcttttgacgaaaacgaaaaaattcatcaagcaagactaagttgttttaat aaaatcgatagcaataaaaaagggtgggttagatttactcctcttggcggacttgacgaa atcggtggaaactgtgccgttttagaaacggaagatagcgctattattatcgattgcggt atgagttttccaagcgaagatatgcatggtgtggatattttgattcctgattttagttat cttagagagataagacataaaattaaaggtttaattatcacacacggacacgaagaccat atcggagcggtgccttatttatttaaagagatgcaatttcctatttacgggacaagttta cctcttgcaatgatagaaaataagttcaaagaacacaaaatgcttcaatacaaaagctat tttagaagcgtaaaaaaacgtcatccgattcaaatcggggattttaaagtagagtggatt catatgactcactctatcgttgatagctcttctcttgctattcaaacacctatcggtacg attattcataccggagacttcaaaatcgaccatacaccgattgacggatatccacctgat ttacacagactcgcacattacggagaaaaaggtgtattggcactgtttagcgactctaca aattcatataaaccgggagttactccgagtgaaagcgtagtgggtaagacgtttgaagat ttgtttatgaagacaaaaggcagagttattatgtctaccttctcgtcaaacattcacagg gtatatcaggctatagaaaaaggtattaagttcggaagaaaagtgtgtattatcggtaga agtatggaacaaaacctaaatgttgctatggatttgggatatatcaaattgccaagagat atttttatagacccgtatgaaataggaaaatatcaagatgaagagattttgattattact actggaagccagggtgagagtatgagtgctctttatagaatggcgattgatgagcataga cacgtaaaaattaaagagggcgatcaaatcattatttcggcaaaagcgattcctggtaat gagcctaccgtttctcagcttattaactttttgatgaaaaaaggcgcaaaagtagcttat cacgaatttagtgagattcacgtctcggggcacgcaagccaagaagagcaaaaattaatg ctaagacttgtaaaacctaaatatttcttcccggtacacggagaatacaatcacttgatg aaacatagagaaacagctatttctaccggaatggacgagaaaaatatttttgttatggaa gacggagagcagtgggaaattacacctaaaaaagtaagaaaagttaaaaacgtaaaagta ggaaaaatctatattgacaatcaaatcaacgagcaaattgaaaccgatgtcgtaattgac agacaaaaacttgccaatgaaggtatcataatgatagttgcgcaagttgacaaacaaaac aaaaaactaataggacgcccgagagttacgacattcggtattatcgccgacaaagaagat aaagctttcgcaaaagagatggaagatttattaatcaactacatcgaccatgcaaaagat tatgtttatgaaaaaaatagaatattcgaaaacgagcttagaaacgttataagaaaacac gtatttagaaaaacaaaaaaatatcctacaatcgtaccaatggtttactttatgtaa

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