Cellulomonas palmilytica: F1D97_00620
Help
Entry
F1D97_00620 CDS
T08423
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cpal
Cellulomonas palmilytica
Pathway
cpal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F1D97_00620 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpal03019
]
F1D97_00620 (recQ)
03400 DNA repair and recombination proteins [BR:
cpal03400
]
F1D97_00620 (recQ)
Enzymes [BR:
cpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F1D97_00620 (recQ)
Messenger RNA biogenesis [BR:
cpal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F1D97_00620 (recQ)
DNA repair and recombination proteins [BR:
cpal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F1D97_00620 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
UJP41482
LinkDB
All DBs
Position
113628..115436
Genome browser
AA seq
602 aa
AA seq
DB search
MLRRVWGYDEFRGDQAEIIDTVVAGGDALVLMPTGGGKSLCYQVPALVREGTGVVVSPLI
ALMQDQVDALSALGVRAGFLNSTQQAWQRREVEEAYLAGELDLLYLAPERLNVPDTIDLL
DRGTVALFAIDEAHCVSQWGHDFRPDYLRLSMLHERWPDVPRVALTATATKVTHTEIAQR
LQLEDARHFVASFDRPNIQYRIVPKDNPRAQLLDLLRTEHAGDAGIVYCLSRASVEQTAE
YLVAQGVAALPYHAGLDRQVRAHNQARFLREDGIVMVATIAFGMGIDKPDVRFVAHLDLP
KSVEGYYQETGRAGRDGLPSTAWMAYGLQDVVQQRRLIDTSEGDAAHRRRLTQHLDAMLA
LCETASCRRVQLLNYFGQQAEPCGNCDTCLTPPSTWDGTVAAQKLLSTIVRMAQRGQRYG
VGHVVDVLRGKRTARVTQLGHESLSTFGIGADLSDAEWRGVVRQLIAAELLAVDTEGYGT
LQLVEASGEVLKGERTVLVRREPERTRRRSSGSGGSGSSGSSSKAAADLDGETLELFEKL
RAWRAGAAKEQGVPAYVVFHDATLRDIALRRPSSVDELATIGGVGATKLERYGEGVLATL
AG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcgccgcgtctgggggtacgacgagttccgcggcgaccaggcggagatcatcgac
acggtcgtcgccggcggggacgcgctcgtgctcatgccgaccggtggcggcaagtcgctg
tgctaccaggtgcccgctctcgtgcgcgagggcaccggcgtcgtcgtctcgccgctgatc
gcgctcatgcaggaccaggtcgacgcgctgtccgcgctcggcgtacgcgccggcttcctc
aactcgacgcagcaggcgtggcagcgccgcgaggtcgaggaggcgtacctcgcgggcgag
ctcgacctgctctacctcgcccctgagcggctcaacgtgccggacacgatcgacctgctg
gaccgcgggaccgtcgcgctgttcgcgatcgacgaggcgcactgcgtgtcgcagtggggc
cacgacttccggcccgactacctgcggctgtcgatgctgcacgagcggtggccggacgtg
ccgcgcgtcgcgctgaccgcgaccgccaccaaggtcacgcacacggagatcgcgcagcgg
ctgcagctcgaggacgcgcggcacttcgtcgcgagcttcgaccggcccaacatccagtac
cggatcgtccccaaggacaacccgcgcgcgcagctgctcgacctgctgcgcacggagcac
gcgggcgacgcgggcatcgtctactgcctgtcccgggcgtcggtcgagcagaccgcggag
tacctggtggcgcagggggtcgccgcgctgccgtaccacgcggggctcgaccggcaggtg
cgcgcgcacaaccaggcgcggttcctgcgcgaggacggaatcgtgatggtcgcgaccatc
gcgttcggcatgggcatcgacaagcccgacgtgcggttcgtcgcgcacctcgacctgccc
aagtccgtcgaggggtactaccaggagaccgggcgcgccgggcgcgacggcctgccgtcg
accgcgtggatggcctacgggctgcaggacgtggtgcagcagcggcgtctcatcgacacc
tcggagggcgacgccgcgcaccggcggcgtctcacgcagcacctcgacgcgatgctcgcg
ctgtgcgagaccgcgtcgtgccggcgcgtgcagctgctcaactacttcggccagcaggcc
gagccgtgcggcaactgcgacacgtgcctgactcctccgtccacgtgggacggcacggtc
gccgcgcagaagctgctctcgacgatcgtgcgcatggcgcagcgcgggcagcgttacggc
gtgggtcacgtggtcgacgtgctgcgcggcaagcgcacggcgcgcgtgacgcagctcggg
cacgagtcgctgtcgacgttcgggatcggcgcggacctgtccgacgccgagtggcgcggc
gtggtgcgccagctcatcgccgcggagctcctggcggtcgacaccgaggggtacgggacg
ctgcagctggtcgaggcgtcgggcgaggtgctcaagggcgagcgcacggtcctggtgcgg
cgcgagccggagcgcacgcgtcggcgctcgtcggggtccggcggctccggctcgtcgggc
tcgtcgtcgaaggcggccgccgacctggacggcgagaccctcgagctgttcgagaagctg
cgcgcgtggcgggccggcgccgcgaaggagcagggcgtgcccgcgtacgtcgtgttccac
gacgcgacgctgcgcgacatcgcgctgcgtcgcccttcgtcggtcgacgagctcgcgacg
atcggcggcgtcggcgcgacgaagctcgagcgctacggcgagggcgtgctcgcgacgctc
gcgggctga
DBGET
integrated database retrieval system
