Cellulomonas palmilytica: F1D97_01295
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Entry
F1D97_01295 CDS
T08423
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
cpal
Cellulomonas palmilytica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
DUF11
zf-HC2
Sigma70_r4_2
DUF3344
Motif
Other DBs
NCBI-ProteinID:
UJP40209
LinkDB
All DBs
Position
complement(247923..251912)
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AA seq
1329 aa
AA seq
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MPRASRDEVEVEAQAAVVRSDAELISAVRAGDESGFAALYERHAAAAAVVARQYTDSAAD
ADDVVADAFTAVYSALRNGNGPDEAFRAYLFTVVRRTAGVRREGARRVQPTDDLATLEAG
TALAGTAEEPALEGFERGVVARAFHSLPERWQAVLWHTEVEGLPPAEIAPALGLTANGVA
ALAYRAREGLRQAYLQQHLRDPLDEGCRAVAGSLGAYVRGGLGTRESTKVATHLEDCDEC
RALVLELGDVNHGLRAVVAPLVLGLAGLGALAHTLPLGAAAAGAAGAAGAAGAGAAAGTG
AAGSGHLAELEGGAGAGAAGGGVAALTGGGAAAGAGGVAAFLASVPAAVVATVAGAVAVA
AVAAAVVLGLGADPKVLEAEPPVATATATPTEAEPTTSASAGPTDEPTPTSSSDPTEPAD
PGVPLPPGVFPDEPAPGLTTDPTPDPTGEPTSEPTAEPTSEPSTGPTTEPSPEPEEPTPP
PRAPEVVVALPAGGLVLAAGVGPQDLAITLRNTGGRPATDLSADLLLPEGVSLEGVREVA
AAAPVRSTGPAVAGAVATGGSATVAALRDSVQALSQATAQDAAQADWTCRGAQTRRASCE
LPSLAAGGAARLVVRVVVDEAFDADDAQIELVVTGVDVDYRPPPLAVHVTPSPARLAVAS
AQESLALVAGRVRDVTFDLRNAGRSAGDRARAELVLPDGLTWTGSVASPGWACEPGATVV
CTRDGLPGRGQVPLTVGLRATRDATAAPVEVLLSPAPASSARSGVPVTLQEPATLALTAE
PTALTVAGGHTSVTDVAVRNTGDLPADAVTLDVTLPQGLTWGGQFDGWSCAVDGPRVRCT
GPGLAADESVTVGLPLVAEPGAVGALGAVVVAASADDADGASTTVEVRGRAPGLEVRSAD
VVLQSGDLGQLAFGVLVTDDDELAADAAQVLLRATLPGNLVVHETGGVTVPDECTVDPKG
RTVECTWPVLGAGETGEVLLPVRSTYSATGTVKLSATAVGLDEPVTGTAAVPGRSGGLAQ
RFTTTTGGWDVTEAGAAVLSCDPGRKECQEALSGKRDNNSQEMKPVDQAPPSGPRATVPV
SSSTTVLVPQGREIAFAGLYWSAVRGSGDGWSAPVERALVRGPGGAYAPVHGESTRRTDG
QYREYYSTFADVTDLVRARGGGTWSLADMAVSTTRKDSDPTYYGGWSLVVVYSAPGDARV
TVYDGSLWVGTAAEPAAFRFAAPAGSKARVGVVGWEGDRTLSGDRLRLGGLCTAATTDLT
PLRYDGTPGSAENAFDSSAVGWSHASSLGIDAKGFAPATLPCEVSSLTPSTSGDQYLVGA
ITLRTENVG
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
gtgccacgagcaagccgggacgaggtcgaggtggaggcgcaggcggctgtcgtgcgcagc
gacgcggagctcatctccgcggtgcgcgcaggcgacgagtcgggcttcgccgcgctctac
gaacgtcacgcggccgccgcggccgtcgtcgcgcggcagtacacggacagcgccgcggac
gccgacgacgtcgtcgcggacgcgttcaccgccgtctactccgcgctgcgcaacggcaac
ggtcccgacgaggcgttccgggcctacctgttcacggtcgtccggcgcaccgcgggcgtg
cggcgcgagggcgcgcggcgcgtgcagccgaccgacgacctcgcgaccctcgaggccggg
acggcgctcgcgggcaccgcggaggagcccgcgctcgagggcttcgagcgcggcgtcgtc
gctcgcgccttccactccctgcccgagcggtggcaggccgtgctgtggcacaccgaggtc
gagggcctgccgcccgccgagatcgcccccgcgctcgggctgaccgccaacggcgtcgcg
gcgctcgcgtaccgcgcgcgcgagggcctgcggcaggcctacctgcagcagcacctgcgc
gacccgctcgacgaggggtgccgcgcggtggccggctcgctcggcgcgtacgtgcgcggc
gggctgggcacgcgcgagagcaccaaggtcgccacgcacctcgaggactgcgacgagtgc
cgcgcgctcgtcctcgagctcggggacgtcaaccacgggctgcgcgcggtcgtcgcgccc
ctcgtgctcggcctcgcggggctcggggcgctggcgcacacgctgccgctgggtgcggcc
gccgccggggcggccggtgcggccggtgccgcgggtgccggagccgccgcgggtacgggt
gccgccgggtccggtcacctcgccgagctcgagggcggcgccggagccggcgccgccggc
ggcggtgtcgcggcgctcaccggtggtggtgcggccgccggcgcaggcggggtcgcggcg
ttcctcgcgagcgtgcccgcggccgtcgtcgcgaccgtcgcgggtgccgtcgccgtcgcc
gcagtggccgcagccgtggtgctcggcctgggtgccgaccccaaggtgctcgaggcggag
cctcccgtcgcgaccgccaccgccacgccgaccgaggccgagccgacgaccagcgcgtcc
gccggcccgaccgacgagccgacgccgacctcgtcgtccgacccgaccgagcccgccgac
cccggcgtgccgctgccgcccggggtcttccccgacgagcccgcgcccgggctcacgacc
gacccgacacccgacccgacgggcgagcccacgtcggagccgaccgccgagccgacgagc
gagccgtccaccgggccgaccaccgagccgtcgcccgagcccgaggagcccacgccgccg
ccgcgcgcacccgaggtggtcgtcgcgctgcccgcgggcgggctcgtgctcgccgcgggc
gtcggtccgcaggacctcgcgatcacgctgcgcaacaccggcggccgtcccgcgaccgac
ctgagcgccgacctgctcctgcccgagggggtgtccctggagggcgtgcgcgaggtcgcc
gccgcggcaccggtccggtccacgggccctgcggtcgccggtgctgtggccacgggcggc
agcgccacggtcgcggcgctgcgcgacagcgtccaggccctgtcgcaggccacggcccag
gacgccgcgcaggccgactggacgtgccgcggcgcgcagacgcgccgcgcgagctgcgag
ctgccgtcgctcgccgcgggcggggccgcgcggctcgtcgtgcgcgtggtcgtcgacgag
gcgttcgacgccgacgacgcgcagatcgagctcgtcgtgacgggcgtcgacgtcgactac
cggccgccgccgctcgcggtgcacgtgacgcccagccccgcgcgtctcgcggtcgcgtcc
gcgcaggagtcgctcgcgctcgtcgcgggccgggtgcgggacgtgacgttcgacctgcgc
aacgcgggccgctccgcgggcgaccgggcgcgcgccgagctcgtgctgccggacggcctc
acgtggaccgggtcggtcgcgtccccggggtgggcctgcgagccgggcgcgaccgtggtg
tgcacgcgcgacgggctgccgggccgcgggcaggtgccgctgaccgtcggtctgcgcgcg
acacgtgacgccaccgccgctcccgtcgaggtgctgctgagtcccgcgcccgcgtcgtcg
gcccgctcgggggtccccgtcacgctgcaggaacccgcgaccctcgccctcacggccgag
ccgacggcgctgaccgtggcaggcggccacacgagcgtcaccgacgtcgccgtgcggaac
accggcgacctgccggccgacgcggtcaccctcgacgtgacgctgccgcagggcctcacc
tggggcgggcagttcgacggctggagctgcgccgtcgacgggccgcgcgtgcggtgcacc
ggcccgggcctcgccgcggacgagagcgtgaccgtcgggctgccgctcgtcgccgagccc
ggagccgtgggcgcgctcggcgcggtcgtcgtcgccgcgtccgccgacgacgccgacggc
gcgagcacgacggtcgaggtgcggggccgggcaccgggactcgaggtgcgttccgcggac
gtcgtgctgcagtccggcgacctcgggcagctcgcgttcggcgtgctcgtgaccgacgac
gacgagctcgcggccgacgcggcgcaggtcctcctgcgcgcgaccctgccgggcaacctc
gtcgtgcacgagaccggtggcgtgaccgtgcccgacgagtgcacggtcgacccgaagggg
cgcacggtcgagtgcacctggcccgtgctcggggcgggcgagacgggcgaggtcctgctc
ccggtgcgctcgacgtactccgcgaccgggacggtgaagctctcggcgaccgccgtcggt
ctcgacgagccggtgaccgggaccgccgccgtgcccggtcggtccggcgggctcgcgcag
cgcttcacgacgacgaccggcggatgggacgtgaccgaggccggtgccgcggtgctctcg
tgcgacccgggacgcaaggagtgccaggaggcgctcagcggcaagcgggacaacaactcg
caggagatgaagcccgtcgaccaggcgccgccgagcgggccgcgcgccacggtcccggtc
tcgtcgagcaccacggtgctcgtcccccaggggcgcgagatcgcgttcgccgggctgtac
tggtccgccgtgcgcggcagcggcgacggatggagcgcaccggtcgagcgcgcgctcgtg
cgcggcccgggcggcgcgtacgcccccgtccacggcgagagcacccggcgcaccgacggg
cagtaccgcgagtactactcgacgttcgccgacgtcaccgacctcgtgcgcgcgcgaggc
ggcgggacgtggtccctcgccgacatggccgtgagcacgacgcgcaaggactcggacccg
acctactacggcggctggtcgctcgtcgtcgtgtactccgcgccgggcgacgcccgcgtg
accgtctacgacgggtcgctgtgggtcggcacggccgcggagcccgccgcgttccggttc
gccgcgcctgccggttcgaaggcgcgggtcggcgtcgtcgggtgggagggcgaccggacg
ctcagcggcgaccggctgcgcctcggcggcctgtgcaccgcggcgaccaccgacctcacg
ccgctgcggtacgacggcacgcccggcagcgccgagaacgcgttcgactcgtcagcggtc
ggctggtcgcacgcgtcgtcgctcggcatcgacgccaagggtttcgcccccgcgacgctc
ccgtgcgaggtctcctcgctcacgcccagcaccagcggcgaccagtacctcgtcggcgct
atcacgctgcgcaccgagaacgtcggttag
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