Cellulomonas palmilytica: F1D97_04270
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Entry
F1D97_04270 CDS
T08423
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cpal
Cellulomonas palmilytica
Brite
KEGG Orthology (KO) [BR:
cpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpal03400
]
F1D97_04270
DNA repair and recombination proteins [BR:
cpal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F1D97_04270
Archaeal homologous recombinant proteins
F1D97_04270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
DUF8755
FBPase_2
Epimerase_2
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
UJP40719
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Position
901359..902540
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AA seq
393 aa
AA seq
DB search
MRILHTSDWHLGRSLHGVDLLDHQAAYLEHLVDVVRSEQVDAVVVAGDVYDRAIPPVEAV
TLLSETLARLAERTTVVLTSGNHDSATRLGFGAALMRERVQLRTRVATLDRPVEVADDEG
RTLLVYGLPYLDPDTVRTELTAPGAAPLARSHEAVTAAAMARVRADVAARSTRLSGGTRP
RSLVAAHAFVVGGVASESERDIRVGGVDHVPSHVLGGVDYVALGHLHGPQAVSGPAGTTM
RYSGSPLAYSFSEQRHTKSSVLVDLSSDEVRTELVPAPVPRRLADVTGALADLLGAAGEA
HVDDWVRVVVTDERRPDDLYARVRARFPHALVVQHRPPQTEQGAVLRAVTAAADPVEVAC
DFVAHVSGARPDDDELAVLRAAYEHAAAAERSA
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcctgcacacctccgactggcacctgggccggtcgctgcacggggtcgacctg
ctcgaccaccaggcggcgtacctggaacacctggtcgacgtggtgcgctccgagcaggtc
gacgcggtcgtcgtcgcgggcgacgtgtacgaccgcgcgatcccgcccgtggaggccgtg
actctgctgtccgagacgctcgcgcggctcgccgagcgcaccaccgtggtcctcacgtcc
ggcaaccatgactccgcgacgcgcctcgggttcggcgccgccctcatgcgcgagcgcgtg
cagctgcgcacgcgtgtcgcgacgctcgaccgtcccgtcgaggtggccgacgacgaggga
cgcacgctgctcgtgtacggcctgccctacctcgacccggacacggtccgcaccgagctc
accgcgccgggtgcggcaccgctcgcgcgctcgcacgaggcggtcaccgccgccgcgatg
gcgcgcgtgcgggccgacgtggccgcgcgctcgacgaggctgtcgggcggcacccggccg
cgcagcctggtcgcggcgcacgcgttcgtcgtcggcggggtcgcgagcgagtccgagcgg
gacatccgggtcggcggcgtcgaccacgtgccctcgcacgtgctgggcggcgtggactac
gtcgcgctcgggcacctgcacgggccgcaggccgtgagcggacccgcgggcacgacgatg
cggtacagcggctcgcccctggcgtactcgttctccgagcagcggcacaccaagtcgagc
gtgctcgtcgacctgtcgtccgacgaggtgcgcaccgagctggtgcccgcgcccgtgccg
cggcggctcgcggacgtgacgggcgcgctcgcggacctgctcggcgccgcgggcgaggcg
cacgtggacgactgggtgcgggtcgtcgtgaccgacgagcgccgccctgacgacctgtac
gcgcgcgtgcgcgcccggttcccgcacgcgctcgtcgtgcagcaccggccgccgcagacg
gagcagggtgccgtgctgcgcgcggtcacggccgcggccgacccggtggaggtcgcgtgc
gacttcgtcgcgcacgtcagcggcgcacgcccggacgacgacgagctcgcggtgctgcgc
gccgcgtacgagcacgccgccgcggcggagcggagcgcctga
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