Cellulomonas palmilytica: F1D97_04620
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Entry
F1D97_04620 CDS
T08423
Name
(GenBank) HAMP domain-containing protein
Organism
cpal
Cellulomonas palmilytica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HAMP
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
UJP40779
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All DBs
Position
975303..980129
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AA seq
1608 aa
AA seq
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MLRRLGIRAKVLAVLAVPMLVLVLLGVYITVSAFDDLEEARATQSVTDTLRAYQPLGQAI
DNEYVVSMTSGDPEVIAAAQAATDQALAEVRQKTKDLPLDRFPDALVQQFQSVQADYETT
LPAARLAVERGGVSSVVRANFQTIENGQLELVAQLGEVFPNRDVAASVTAYRQLSQTSTD
LVAELIQGSSLLGGVISPALGAVYQEKVDAVESARTQSAVALNRMSGLELKLPSGQPSSA
FIAQRALLASGDQDAVAQVDPAAYVGEIETQTTQLVELAGTAIDHARSLADADVDAALQR
FYLTIAATILAAGLSFLLALVVSRSIVNPLRRLTSAASDVRERLPRIVEQVATPGEQPDV
QLDPIPVNSRDEVGRLAQAFNSMNATTVRVAQEQAALRGSIAEMFVNVARRDQVLLNRQL
SFIDSLERTEEDPNTLANLFRLDHLATRMRRNAESLLVLAGIDSGRRLRDAMPLSDVIRT
ASSEIEQYDRVELDLQVDPHMLGFNALPAAHMLAELLENATVFSEPETPVTVTTGVSGQF
VAVRIRDHGLGMTDEEIEAANAKILSSAAGDALGAQRLGLFVVGRIAQKLGAAVRLSKAD
GGTGTDTTVLLPASLFATTETSSYGAPASVEATMAQDAAVAPEVAPVDLAALTDGETSLG
LPRRRRGDGSEPTADSAPIPVPQLSPSGLPTRGGGELPARPRKTFDENAIVLPETAVPTL
SPDLSAAAPDWAPAVQQATSGSGLPSRAARASATPPPPAAPAPAAEPAAPKEDTPSIPSP
AARAGLFSGFRTRNAIVEGGDGGVSDQVRAPWMSLGAHGLQPQQPAAPEVPALAADDDEP
WTPESAQPVTEVPGLVPDDESAPEPAAEAAPAPVEQPWAPTFASDETQAFEPVTAEPVEA
EQYAPAASDDQAYQPASYEPTPFGSSVEAPAEPSSFEPASSEPAQHEPAQYEPAQYEPAQ
YEPASFAADQAEVDEPEAAAPPSYEPASYEPASYEPSFEQTSYEPVGYEASEPEAVEPAA
YEPLSYEQPSHEQPSHEQEQVEEQAAPASYEPASYEPASYEPVSHEQPSYEQPSHEPAAY
EPASYEPAAYEPASYEQASHELASRDEQEPAPAAYEPEQPAAEAWSAPAPVEPAPVEPAS
EAPRVSFTSYSGYAGWSGARRRAAADAEKFDFERTLDEARAWHTGAQPVVADAAPAAEQA
PVAEPAYAEPVVEPVYAEPVVEPAAEQLAEPAADEPAWQPAWQAPSWEAVTGAVPVVEEP
AAQAVPSLEPTEPASSFAVPSLVADEAEPQAEGEQVWAETTPAWGAPAWPSLAESEAPAE
APVAHAEQGYAPAPVEQPFAQQPAPVEPVAPVAPVAPQPVAEQPAAHAWGAPTGFGAQGV
SELERQPAEEKGSRKRWAGLFGRRKGEAGPAESAPASVPTPTPAPAPAPAAGWSAPASVP
PESPVRTEAPAWSAPEPPAPAAPAPVAAAPASSGTWAPPEWAASRPAAAAAPAVDVPHPA
VPPSVAPRIGTLDDNVAAMLALRSDIQEQALSELSQLSAYRPSVNRSGEQLTKRVPTAVP
ATAPEPTEPAAPVQRDANELRNRLSSFQSGTSRGRQAAGSGESPRSTS
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgacgacttggcatcagagccaaggtgctggccgtactggccgtccccatgctc
gtgctcgtcctgctcggcgtctacatcaccgtgagcgcgttcgacgacctcgaggaggcg
cgcgccacgcagagcgtcaccgacaccctgcgcgcgtaccagccgctgggtcaggccatc
gacaacgagtacgtcgtgtcgatgacgtccggcgaccccgaggtgatcgccgccgcgcag
gccgcgacggaccaggcgctcgccgaggtgcgccagaagaccaaggacctgccgctcgac
cggttcccggacgcgctcgtccagcagttccagtccgtccaggcggactacgagaccacg
ctgcccgccgcgcgcctcgcggtcgagcgcggtggtgtgtcctccgtggtccgggcgaac
ttccagaccatcgagaacggccagctcgagctcgtcgcccagctcggtgaggtcttcccc
aaccgagacgtcgccgcgtcggtcaccgcgtaccgccagctgtcgcagacgtcgacggac
ctcgtcgccgagctcatccagggctcctcgctcctcggcggtgtcatcagccccgcgctc
ggcgccgtctaccaggagaaggtcgacgcggtcgagtccgcccgcacgcagtccgcggtc
gcgctcaaccgcatgtccggcctcgagctgaagctgcccagcggccagccctcgtccgcg
ttcatcgcccagcgtgcgttgctggcctcgggcgaccaggacgccgtcgcccaggtcgac
cccgccgcgtacgtcggcgagatcgagacgcagacgacgcagctcgtcgagctcgccggc
acggccatcgaccacgcgcgctcgctcgccgacgccgacgtggacgccgcactgcagcgg
ttctacctgacgatcgccgcgaccatcctcgcggccggcctgtccttcctgctcgccctc
gtcgtctcccgctcgatcgtcaacccgctgcggcgcctcacctcggccgcgtccgacgtc
cgtgagcgtctcccgcggatcgtcgagcaggtggcgacccccggtgagcagccggacgtc
cagctcgacccgatccccgtgaactcgcgagacgaggtcggccgactggcccaggcgttc
aactcgatgaacgcgaccacggtgcgtgtcgcgcaggagcaggccgcgctgcgtggctcc
atcgccgagatgttcgtcaacgtcgcccgtcgcgaccaggtcctcctcaaccgccagctg
tcgttcatcgactcgctcgagcgcaccgaggaagacccgaacacgctggcgaacctgttc
cgcctcgaccacctcgcgacccggatgcgtcgtaacgcggagtcgctcctcgtgctcgcg
ggcatcgactccggtcgtcgtctgcgcgacgcgatgccgctctccgacgtgatccgtacc
gcgtcctccgagatcgagcagtacgaccgcgtcgagctcgacctgcaggtcgacccgcac
atgctcggcttcaacgcgctgcccgccgcgcacatgctcgccgagctcctcgagaacgcg
acggtcttctccgagccggagacccccgtcaccgtcaccaccggcgtgtccggccagttc
gtcgcggtccgcatccgcgaccacggcctcggcatgaccgacgaggagatcgaggccgcg
aacgccaagatcctctcgtccgccgccggtgacgccctcggcgcccagcgcctcggcctc
ttcgtggtgggccgcatcgcccagaagctcggtgcggcggtccgcctctcgaaggccgac
ggcggcacgggtaccgacaccaccgtgctgctgcccgcgtcgctgttcgcgacgaccgag
acctcgtcgtacggcgcgcccgcctcggtcgaggcgacgatggcgcaggacgccgccgtg
gcccccgaggtcgcgcccgtcgacctcgccgcgctcaccgacggcgagacgtcgctcggc
ctgccgcgtcgtcgccgcggcgacggcagcgagccgaccgcggactccgcgcccatcccc
gtcccgcagctcagcccctccgggctgcccacgcgtggcggcggcgagctgccggcccgc
ccgcgcaagacgttcgacgagaacgcgatcgtcctgcccgagaccgccgtgccgaccctg
tcgccggacctgtccgccgcggcccccgactgggcgcccgcggtccagcaggccacgtcc
ggctcgggcctgcccagccgtgccgcccgcgcctccgcgacgccgccgcccccggcggcg
cccgcgccggccgccgagccggccgcgcccaaggaggacacgcccagcatcccgtcgccc
gcggctcgtgccggcctgttctccgggttccgcacgcgcaacgcgatcgtcgagggtggc
gacggcggcgtgagcgaccaggtccgcgcgccgtggatgtcgctcggtgcccacggcctg
cagccgcagcagcccgcagcccccgaggtccccgcgctcgccgcggacgacgacgagccg
tggacgcccgagtccgcgcagcccgtcaccgaggtgcccggcctcgtccccgacgacgag
tccgcgcccgagcccgccgccgaggccgcaccggcccccgtcgagcagccctgggcaccg
acgttcgcgtccgacgagacccaggcgttcgagcccgtgaccgccgagcccgtcgaggcg
gagcagtacgcgccggccgcgtccgacgaccaggcctaccagcccgcctcctacgagccg
acgccgttcgggtcctcggtcgaggccccggcggagccgagctcgttcgagccggcgtcg
tccgagccggcccagcacgagccggcccagtacgagcccgcccagtacgagccggcccag
tacgagcccgcgtcgttcgcggccgaccaggccgaggtcgacgagcccgaggccgccgcg
ccgccgtcgtacgagccggcgtcgtacgagcccgcgtcctacgagccctcgttcgagcag
acgtcgtacgagcctgtcggctacgaggcgtccgagcccgaggccgtcgagcccgccgcg
tacgagccgctctcgtacgagcagccgagccacgagcagccgagccacgagcaggagcag
gtcgaggagcaggccgcgcccgcgtcctacgagcccgcgtcctacgagcccgcgtcctac
gagccggtctcgcacgagcagccgtcgtacgagcagccgtcgcacgagccggctgcctac
gagcccgcgtcgtacgagcctgccgcctacgagcccgcgtcgtacgagcaggcgtcgcac
gagctcgcctcgcgcgacgagcaggagcccgctcccgccgcgtacgagcccgagcagccg
gccgccgaggcgtggtccgccccggcgcccgtcgagccggccccggtcgagcccgcgtcc
gaggcgccgcgcgtgtccttcacgtcgtacagcggctacgccggctggtccggcgcccgc
cgccgcgccgccgccgacgccgagaagttcgacttcgagcgcacgctcgacgaggcccgc
gcctggcacacgggtgcgcagccggtcgtcgccgacgccgcgcccgccgccgagcaggcg
ccggtcgccgagccggcctacgccgagcccgtcgtcgagccggtctacgccgagcccgtc
gtcgagccggctgccgagcagctcgccgagcccgccgccgacgagcccgcgtggcagccc
gcctggcaggcgccgtcgtgggaggccgtcaccggtgccgtcccggtcgtcgaggagccc
gcggcgcaggccgtcccgtccctcgagccgacggagcctgcctcgtcgttcgcggtcccg
tcgctcgtcgcggacgaggccgagccgcaggccgagggtgagcaggtctgggccgagacg
acccccgcgtggggtgcgccggcgtggccgtcgctcgcggagagcgaggcaccggccgag
gcccccgtggcgcacgccgagcagggctacgcgcccgccccggtggagcagccgttcgcg
cagcagcccgcgcccgtcgagccggtcgccccggtcgcccccgtggcgccgcagcccgtc
gccgagcagccggccgcccacgcctggggtgcgcccaccgggttcggggcgcagggcgtc
tccgagctcgagcgtcagcccgccgaggagaagggctcgcgcaagcgctgggccggtctg
ttcggtcgccgcaagggtgaggccggtccggccgagtccgcaccggcgtcggtgccgacg
cccacgccggcacccgccccggctccggccgccggctggtcggctcccgcgtcggtcccg
cccgagtcgccggtccgcaccgaggcccccgcctggtccgcgcccgagcccccggctccg
gccgcacccgcgccggtcgccgcggcgcccgcgtcgtcgggcacctgggcgccgccggag
tgggccgcgagccgccccgccgccgctgcagcacctgcggtggacgtcccccacccggcc
gtgccgccgtcggtcgccccgcgcatcgggacgctcgacgacaacgtggccgcgatgctg
gcgctgcgctccgacatccaggagcaggcgctgtccgagctgagccagctgtcggcgtac
cgcccgagcgtgaaccgctccggcgagcagctcacgaagcgtgtgccgacggccgtcccg
gccacggctcccgagcccaccgagccggccgccccggtccagcgcgacgcgaacgagctg
cgcaaccggctgtcgagcttccagtccggcacgtcgcgcggccgccaggccgccggctcc
ggcgagtcgccgaggagcacgtcgtga
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