Cellulomonas palmilytica: F1D97_05095
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Entry
F1D97_05095 CDS
T08423
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cpal
Cellulomonas palmilytica
Brite
KEGG Orthology (KO) [BR:
cpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpal03032
]
F1D97_05095 (topA)
03400 DNA repair and recombination proteins [BR:
cpal03400
]
F1D97_05095 (topA)
Enzymes [BR:
cpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
F1D97_05095 (topA)
DNA replication proteins [BR:
cpal03032
]
Prokaryotic type
DNA Topoisomerases
F1D97_05095 (topA)
DNA repair and recombination proteins [BR:
cpal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F1D97_05095 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UJP40860
LinkDB
All DBs
Position
1082536..1085244
Genome browser
AA seq
902 aa
AA seq
DB search
MSAGRKLVIVESPAKARTIAGYLGDDFDVEASVGHIRDLPQPSELPAEMKKGPFGKFAVD
VDNGFQPYYVVDSDKKKKVAELKKLLKASDELYLATDEDREGEAIAWHLLAELKPKVPVK
RMVFHEITREAITRALENTRELDDRLVDAQETRRILDRLYGYEVSPVLWRKVRQGLSAGR
VQSVATRLVVERERERMAFVPADYWDLTGTFTVADDDEPAFSARLTALDGARVASGRDFT
DRGVLKTDAVQLDEAAATSLVTALDGAAFEVRSLETKPYTRRPAAPFTTSTLQQEASRKL
RMSSRQTMRTAQTLYENGYITYMRTDSPVLSTQAIDAARRQAAELYGAEYVPDAPRVYTS
KSKGAQEAHEAIRPAGDHFRTPAQVARELSGDQFKLYELIWKRTVASQMADARGQTASVK
LGAVASDGRDAVFSASGTVITFRGFLAAYEEGRDVSRYDDDAAPADEKDARLPKMAEGDP
LTGRDLTADGHRTSPPPRYTEASLVKALEERGIGRPSTYAATISTILDRGYVTSRGQALV
PSWLAFAVTRLLEENFDRLVDYDFTASMEEDLDAIASGEKDRVAWLTHFYFGDDAHEGDG
LRGLVANLGDIDAREVNSIEIGEGITLRVGRYGPYLEDPSVLGEDGNPRRASVPEDLAPD
ELTVERARELLESEPEGDKVLGTDPTTGTTIVAKNGRYGPYVTEVLPEPELDPGLSAAAR
KRALAAAPKPRTASLFKSMSLDTVTIDDALKLLSLPRVVGVDPESGAEITAQNGRYGPYL
KKGTDSRTLASEDALFTTTLEEALAIYAQPKRGRGATATPPLRELGDDPTSGKPIVVKDG
RFGLYVTDGVTNRTLPKDVTAESITPEQAIQLLADKRASAPAKKKAPARRTTTTRKKAPS
KS
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagggcgcaagctcgtcatcgtcgagtcgcccgccaaggcccgcaccatcgcg
gggtacctgggcgacgacttcgacgtcgaggcgagcgtcgggcacatccgtgacctgccg
cagccgtcggagctgccggccgagatgaagaagggcccgttcggcaagttcgcggtcgac
gtcgacaacggcttccagccgtactacgtggtcgactccgacaagaagaagaaggtcgcg
gagctgaagaagctcctcaaggcgtccgacgagctctacctcgccaccgatgaggaccgc
gagggcgaggcgatcgcgtggcacctgctggccgagctcaagcccaaggtgccggtcaag
cgcatggtgttccacgagatcacgcgcgaggcgatcacccgggccctggagaacacgcgc
gagctcgacgaccgcctggtcgacgcgcaggagacccgccgcatcctggaccgcctgtac
ggctacgaggtgtccccggtgctgtggcgcaaggtccgccagggcctgtccgcgggccgc
gtgcagtcggtcgcgacgcgcctcgtcgtcgagcgtgagcgcgagcgcatggcgttcgtg
ccggcggactactgggacctcacgggcacgttcacggtggccgacgacgacgagcccgcg
ttctccgcgcggctgacggcgctggacggtgcgcgcgtcgcgtcgggccgtgacttcacg
gaccgcggcgtgctgaagaccgacgcggtgcagctcgacgaggccgcggccacgtcgctc
gtgaccgcgctcgacggcgcggcgttcgaggtccgcagcctcgagacgaagccgtacacg
cgccgcccggccgcgccgttcaccacgtccacgctgcagcaggaggcgtcgcgcaagctg
cgcatgtcctcgcggcagaccatgcgcaccgcgcagacgctgtacgagaacggctacatc
acgtacatgcgtaccgactcgccggtcctgtcgacgcaggcgatcgacgccgcgcgccgc
caggccgccgagctgtacggcgccgagtacgtgccggacgccccgcgcgtctacacgtcc
aagtcgaagggcgcgcaggaggcgcacgaggcgatccgccccgcgggcgaccacttccgc
acgccggcgcaggtcgcgcgcgagctgtcgggcgaccagttcaagctgtacgagctgatc
tggaagcgcacggtcgcctcgcagatggccgacgcgcgcggccagaccgcgtccgtgaag
ctcggcgcggtcgcgtccgacggccgggacgcggtgttctccgcgtccggcacggtcatc
acgttccgcgggttcctcgcggcgtacgaggagggccgcgacgtctcgcggtacgacgac
gacgccgcgccggccgacgagaaggacgcgcgcctgccgaagatggccgagggcgacccg
ctcacgggccgcgacctcaccgccgacgggcaccgcacgtccccgccgccgcgctacacc
gaggcgtcgctcgtcaaggcgctcgaggagcgcggcatcggccgcccgtcgacgtacgcc
gcgacgatctcgacgatcctcgaccgcgggtacgtcacgagccgcgggcaggcgctcgtg
ccgtcgtggctcgcgttcgcggtgacgcgcctgctcgaggagaacttcgaccggctcgtc
gactacgacttcaccgcctcgatggaggaggacctcgacgcgatcgcgtccggcgagaag
gaccgcgtcgcgtggctgacgcacttctacttcggcgacgacgcgcacgagggcgacggc
ctgcgcgggctcgtggcgaacctcggcgacatcgacgcgcgcgaggtgaactcgatcgag
atcggcgagggcatcacgcttcgcgtggggcgctacgggccgtacctcgaggacccgtcc
gtgctcggcgaggacggcaacccgcgccgcgcgtcggtgcctgaggacctcgcgcccgac
gagctgaccgtcgagcgggcgcgcgagctcctggagagcgagcccgagggcgacaaggtg
ctcggcaccgaccccaccacgggcacgacgatcgtcgcgaagaacggccgctacggcccg
tacgtcaccgaggtgctgcccgagcccgagctcgacccgggcctgtccgcagcggcccgc
aagagggccctggccgccgcgccgaagccgcgcaccgcgtcgctgttcaagtcgatgtcg
ctcgacaccgtgacgatcgacgacgcgctcaagctgctgtcgctgccgcgcgtcgtgggt
gtcgaccccgagtcgggcgccgagatcaccgcgcagaacggccgctacggcccgtacctg
aagaagggcacggactcgcgcacgctggcgtcggaggacgcgctgttcacgacgacgctc
gaggaggcgctcgcgatctacgcgcagcccaagcgcggccgcggcgcgaccgcgaccccg
ccgctgcgcgagctcggcgacgacccgacctcgggcaagccgatcgtcgtgaaggacggc
cggttcgggctgtacgtgacagacggcgtgaccaaccggacgctgccgaaggacgtgacc
gcggagtcgatcacgcccgagcaggcgatccagctgctcgccgacaagcgcgcctcggca
cccgcgaagaagaaggccccggcgcgtcgcacgacgacgacgcgcaagaaggccccgtcg
aagtcctga
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