Cellulomonas palmilytica: F1D97_05710
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Entry
F1D97_05710 CDS
T08423
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cpal
Cellulomonas palmilytica
Pathway
cpal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F1D97_05710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpal03400
]
F1D97_05710
Enzymes [BR:
cpal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
F1D97_05710
DNA repair and recombination proteins [BR:
cpal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
F1D97_05710
Prokaryotic type
F1D97_05710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UJP40961
LinkDB
All DBs
Position
complement(1226915..1227592)
Genome browser
AA seq
225 aa
AA seq
DB search
MVPAPLADLVAPDWAAALAPVEHHVHVAGRFLRDEVAAGRAYLPAPDAILRAFHRPLADV
RVLVVGQDPYPTPGHPMGLSFSVQPDVRPVPRSLANIFRELVDDLGVPAPTSGDLTPWAD
QGVMLLNRVLTVRPGAPASHRGKGWEAVTDRAIAALVERGGPLVAILWGRDAQTLRPALG
SVPTVESVHPSPLSASRGFFGSRPFSRVNDLLVAQGGTPVDWRLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtggttcccgcaccgctcgccgacctcgtggcccccgactgggccgccgccctcgcgccc
gtcgagcaccacgtgcacgtcgccggccggttcctgcgcgacgaggtcgccgccgggcgc
gcgtacctgcccgcgcccgacgcgatcctgcgcgcgttccaccgcccgctcgccgacgtg
cgcgtgctcgtcgtcgggcaggacccctaccccacgcccgggcaccccatgggcctgtcg
ttctccgtgcagcccgacgtgcgacccgtgccgcgctcgctcgccaacatcttccgcgag
ctcgtcgacgacctcggcgtacccgcccccacgagcggggacctcacgccgtgggccgac
cagggcgtcatgctgctcaacagggtcctcaccgtgcggcccggcgcaccggcctcccac
cgcggcaaggggtgggaggccgtgaccgaccgggccatcgcggcgctcgtcgagcgcggc
gggccgctcgtcgcgatcctgtgggggcgcgacgcgcagaccctcaggcccgcgctgggc
tcggtgccgaccgtcgagtccgtgcacccgagcccgctgtccgcgtcacgcgggttcttc
gggtcgcgcccgttctcgcgcgtcaacgacctgctcgtcgcccagggcggcaccccggtc
gactggcgcctgccctga
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