Cellulomonas palmilytica: F1D97_09615
Help
Entry
F1D97_09615 CDS
T08423
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
cpal
Cellulomonas palmilytica
Pathway
cpal02020
Two-component system
cpal02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cpal00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F1D97_09615
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
F1D97_09615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpal03021
]
F1D97_09615
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
cpal02035
]
F1D97_09615
Transcription machinery [BR:
cpal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F1D97_09615
Bacterial motility proteins [BR:
cpal02035
]
Flagellar system
Flagellar assembly proteins
Stator
F1D97_09615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
CENP-B_N
HTH_28
KORA
GntR
HTH_38
Sigma70_ECF
MarR
CT_C_D
EutK_C
HTH_31
Motif
Other DBs
NCBI-ProteinID:
UJP41697
LinkDB
All DBs
Position
2124679..2125479
Genome browser
AA seq
266 aa
AA seq
DB search
MALPEVPTQRGVPTPDVAEAWAAYKSTGERAHRDALILHYASLVTAVAGRVGMRLPATVE
QADLVSYGMFGLIDAIEKYQLDRSVKFESYASSRIRGAIIDELRAMDWVPRSVRTKARSV
DRAQAELEATLHRAPTEAELAAHLGVPVTELRQVCSQLATSNLAALDELLGGEDRAGGVS
LGDTLCDDRIDDPAGTLADAETAHLLARSIEQLGERERIVVVLYYYEGMTLAEIGRVLGV
TESRISQMHTAAMTRLRTRLTDAERG
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atcgcactccccgaggtcccgacccagcgcggcgtgccgacgccggacgtcgccgaggcg
tgggccgcgtacaagagcacgggcgagcgcgcccaccgcgacgcgctgatcctgcactac
gcgtcgctcgtgaccgcggtcgccggccgagtcggcatgcgcctgcccgcgaccgtcgag
caggcggatctcgtctcgtacggcatgttcggcctgatcgacgcgatcgagaagtaccag
ctcgaccggtcggtgaagttcgagtcgtacgcgtcctcccgcatccggggcgcgatcatc
gacgagctgcgcgcgatggactgggtcccgcgctcggtacgcaccaaggcccgctcggtg
gaccgggcgcaggccgagctcgaggcgacgctgcaccgcgcgcccacggaggcggagctc
gcggcccacctcggcgtgcccgtgaccgagctgcgccaggtgtgctcgcagcttgcgacg
tcgaacctcgcggcgctcgacgagctgctcggcggcgaggaccgcgcgggcggcgtctcg
ctcggcgacacgctgtgcgacgaccggatcgacgacccggccggcacgctcgccgacgcg
gagaccgcgcacctgctcgcgcgctcgatcgagcagctcggcgagcgggagcgcatcgtc
gtcgtcctgtactactacgagggcatgacgctcgcggagatcggccgggtgctcggcgtg
accgagtcgcgcatctcgcagatgcacaccgcggccatgacgcgcctgcgcacgcgcctg
acggacgccgagcgcggctga
DBGET
integrated database retrieval system
