Cellulomonas palmilytica: F1D97_11030
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Entry
F1D97_11030 CDS
T08423
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
cpal
Cellulomonas palmilytica
Brite
KEGG Orthology (KO) [BR:
cpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cpal03051
]
F1D97_11030 (pafA)
Enzymes [BR:
cpal01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
F1D97_11030 (pafA)
Proteasome [BR:
cpal03051
]
Prokaryotic proteasome
Bacterial regulatory particles
F1D97_11030 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
UJP38912
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All DBs
Position
2448500..2449861
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AA seq
453 aa
AA seq
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MDKRIFGLETEYGVTCAATDGRGLSADEVARYLFRKVVAWGRSSNVFLRNGSRLYLDVGS
HPEYATAECDDVRQLVTHDRAGERILEGLVADAQQRLEHEGLPGTIHLFKNNTDSAGNSY
GCHENYLVRRQGDFARLSDVLVPFLITRQVLTGAGKVLATPRGAVYCLSQRADHIWEAVS
SATTRSRPIINTRDEPHADAEHFRRLHVIVGDSSMSESTTMLKVGATDLVLRLVEAGIPI
RDMSLENPIRAIREISHDMTGTAPITLASGRTTTALDLQEEYLSRVSDFVAQRGGGSPQD
KQVLELWERGLHALRTQDLSLVERELDWVIKYRLIERYRAKHDLPLSDVRVQRLDLAYHD
ISRTEGLYNLLAAKGLVERLTTDLEVFEATSVPPQTTRAKLRGDFVRAAQEARRDYTVDW
VHLKLNDQAQRTVLCKDPFRNVDERVERLIESM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggacaagcggatcttcggcctcgagacggagtacggcgtcacgtgcgccgccacggac
gggcgcgggctgtcggccgacgaggtcgcgcgctacctgttccgcaaggtggtggcgtgg
gggcgctcgtcgaacgtgttcctgcgcaacgggtcacggctgtacctcgacgtcggctcg
caccccgagtacgcgacggcggagtgcgacgacgtgcgccagctcgtcacgcacgaccgc
gcgggtgagcggatcctcgaggggctggtggcggacgcgcagcagcgcctcgagcacgag
ggcctgccgggcaccatccacctgttcaagaacaacacggactccgcgggcaactcctac
ggctgccacgagaactacctcgtgcggcgccagggtgacttcgcgcggttgtcggacgtg
ctcgtgccgttcctcatcacgcggcaggtgctcacgggcgcgggcaaggtcctggcgacc
ccgcggggcgcggtgtactgcctgtcgcagcgcgccgaccacatctgggaggccgtctcg
agcgcgacgacccgctcgcgcccgatcatcaacacgcgcgacgagccgcacgccgacgcc
gagcacttccgccggctgcacgtgatcgtgggcgactcctcgatgtccgagtcgacgacg
atgctcaaggtcggggcgaccgacctggtgctgcgcctcgtcgaggcgggcatcccgatc
cgcgacatgtcgctcgagaacccgatccgcgcgatccgcgagatcagccacgacatgacg
ggcaccgcgccgatcacgctcgcgagcgggcgcacgaccaccgcgctcgacctgcaggag
gagtacctgtcccgcgtgagcgacttcgtcgcgcagcgcggcggggggtcgccgcaggac
aagcaggtgctcgagctgtgggagcgcgggctgcacgcgctgcggacgcaggacctgtcg
ctcgtggagcgcgagctcgactgggtcatcaagtaccggctcatcgagcgctaccgcgcc
aagcacgacctgccgctgtcggacgtacgcgtccagcgcctcgacctggcgtaccacgac
atctcgcgcaccgagggcctgtacaacctgctggccgcgaagggcctggtcgagcgcctg
acgaccgacctcgaggtgttcgaggcgacgagcgtgccgccgcagacgacccgtgccaag
ctgcgcggcgacttcgtgcgcgccgcccaggaggcgcgccgggactacacggtcgactgg
gtgcacctcaagctcaacgaccaggcgcagcgcaccgtgctgtgcaaggacccgttccgc
aacgtcgacgagcgcgtggagaggctcatcgagtcgatgtga
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