Cellulomonas palmilytica: F1D97_12125
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Entry
F1D97_12125 CDS
T08423
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cpal
Cellulomonas palmilytica
Pathway
cpal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F1D97_12125 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpal03400
]
F1D97_12125 (ruvB)
Enzymes [BR:
cpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F1D97_12125 (ruvB)
DNA repair and recombination proteins [BR:
cpal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F1D97_12125 (ruvB)
RecFOR pathway proteins
F1D97_12125 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
AAA
RuvB_C
AAA_5
TIP49
AAA_16
Mg_chelatase
nSTAND3
AAA_14
RNA_helicase
TsaE
AAA_3
Zeta_toxin
AAA_22
Rad17
AAA_25
AAA_18
NTPase_1
AAA_33
AAA_28
NACHT
IstB_IS21
Sigma54_activ_2
ABC_tran
NPHP3_N
AAA_17
NB-ARC
AAA_19
DUF815
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UJP39097
LinkDB
All DBs
Position
complement(2690789..2691856)
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AA seq
355 aa
AA seq
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MADRDDELSELVTERFPAESLVHAGADDLERAAEAALRPRRLAEFVGQRVVREQLSVVLD
AARARGRAPDHVLLSGPPGLGKTTLAMIIAAELGTSLRVTSGPAIQHAGDLAAVLSSLEE
GEVLFLDEIHRIARPAEELLYVAMEDFRVDVVVGKGAGASAIPLSLPPFTVVGATTRAGL
LPAPLRDRFGFTGHLDFYDADELEQVLLRSAGLLGVRLAGAAAREIASRSRGTPRIANRL
LRRVRDWAEVRGDGTLSLAAARAALEVYEVDERGLDRLDRSVLEALCLRFGGGPVGLTTL
AVAVGEEPETVETVAEPFLVREGLVGRTPRGRVALPSAWSHLGLAPPQDPGTLFA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaccgcgacgacgagctctccgagctcgtgaccgagcgcttccccgcggagtcg
ctcgtgcacgcaggcgcggacgacctggagcgcgccgccgaggcggcgctgcgcccgcgg
cggctcgcggagttcgtcggacagcgggtggtgcgcgagcagctctcggtggtcctggat
gccgcgcgcgcccgtgggcgggcgcccgaccacgtgctgctgtccggcccgcccggactg
ggcaagacgacgctcgcgatgatcatcgcggccgagctcggcacgtccctgcgggtgacg
agcggtccggcgatccagcacgcgggcgacctcgcggccgtgctctcctcgctcgaggag
ggcgaggtgctgttcctcgacgagatccaccgcatcgcgcgccccgccgaggagctgctg
tacgtggcgatggaggacttccgcgtcgacgtcgtggtcggcaagggcgcgggggcgtcc
gcgatcccgctgtcgctcccgccgttcaccgtggtcggcgccaccacgcgcgccggcctg
ctgccggcgccgctgcgcgaccgcttcggcttcacgggccacctggacttctacgacgcc
gacgagctcgagcaggtgctgctgcgctcggccgggctgctcggtgtgcggctcgcgggt
gccgcggcgcgggagatcgcgtcgcgctcgcgcggcacgccccgcatcgcgaaccgcctc
ctgcggcgcgtgcgggactgggccgaggtgcgcggcgacggcaccctgagcctcgccgcg
gcgcgcgccgcgctggaggtgtacgaggtcgacgagcgcggcctcgatcgcctcgaccgg
tcggtgctcgaggcgctgtgcctgcggttcggcggcgggccggtcggcctcacgacgctc
gcggtcgccgtgggcgaggagcccgagaccgtggagacggtcgccgagcccttcctggtg
cgcgaggggctcgtcggacgcacgccacgcggtcgggtggcgctgccgtccgcctggtcc
cacctggggctcgcaccgccgcaggacccggggaccctgttcgcctga
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