Cellulomonas palmilytica: F1D97_16130
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Entry
F1D97_16130 CDS
T08423
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cpal
Cellulomonas palmilytica
Pathway
cpal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F1D97_16130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpal03021
]
F1D97_16130
03400 DNA repair and recombination proteins [BR:
cpal03400
]
F1D97_16130
Enzymes [BR:
cpal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F1D97_16130
Transcription machinery [BR:
cpal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
F1D97_16130
DNA repair and recombination proteins [BR:
cpal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
F1D97_16130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_XRCC3_RpoA
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
UJP39794
LinkDB
All DBs
Position
complement(3593612..3594622)
Genome browser
AA seq
336 aa
AA seq
DB search
MLIAQRPTLAEEVISENRSRFSIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFSTVPGVKEDVTEIILNIKNLVVSSENDEPVVMYLRKQGPGEVTAADIVPPAGVEVHN
PDLHLATLNDKGKLEIELTVERGRGYVSAAQNKTFDAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKAAISPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPTD
AALAADLALPIEDLQLTIRSYNCLKREGIHTVGELVARSEADLLDIRNFGAKSITEVKEK
LAELGLSLKDSPLDFDPSASAYYGDDEGDFVEDEQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatcgcacagcgccccaccctggccgaagaggtcatctcggagaaccgttcgcgg
ttctccatcgagccgctcgagccgggcttcggctacacgctcggcaactcgctccgccgg
acgctgctgtcctccatccccggtgccgccgtcacgtcgatccgtatcgacggcgtcctg
cacgagttctcgaccgtgccgggggtcaaggaggacgtcaccgagatcatcctcaacatc
aagaacctcgtggtctcgtcggagaacgacgagcccgtcgtgatgtacctgcgcaagcag
ggcccgggtgaggtcaccgccgcggacatcgtgccgccggcgggcgtcgaggtgcacaac
cccgacctgcacctcgcgacgctcaacgacaagggcaagctcgagatcgagctgaccgtc
gagcgcggccgtggctacgtgtcggccgcgcagaacaagacgttcgacgccgagatcggc
cgcatcccggtcgactcgatctactcgccggtcctcaaggtgacctacaaggtcgaggcg
acgcgtgtcgagcagcgcacggacttcgacaagctcatcgtcgacgtcgagacgaaggcg
gccatcagcccgcgcgacgcgctcgcgtcggccggcaagacgctcgtcgagctgttcggc
ctggcgcgtgagctgaacgtcgaggccgagggcatcgagatcggcccgtcgccgacggac
gcggccctggccgcggacctggcgctgccgatcgaggacctgcagctgacgatccgttcg
tacaactgcctcaagcgtgagggcatccacacggtcggcgagctcgtcgcccgttcggag
gccgacctcctggacatccgcaacttcggcgcgaagtcgatcacggaggtcaaggagaag
ctcgccgagctcggtctgtccctcaaggacagcccgctcgacttcgacccgtccgcgtcg
gcctactacggcgacgacgagggcgacttcgtcgaggacgagcagtactga
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