Carica papaya (papaya): 110806677
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Entry
110806677 CDS
T05151
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110806677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpap03009
]
110806677
Ribosome biogenesis [BR:
cpap03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110806677
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
EIF3I
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_NOL10_N
Cytochrom_D1
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
110806677
NCBI-ProteinID:
XP_021887289
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MSLIPRNVKSRSVGKVKREDNDEAALLENERNIENGTDSDLDITKTKKRRKEKEREEEIE
QEKERKKLENFLFGSLYSPVVFGKEEEEEKDGDDLFVVVPSANRELTVYENDDGISEESG
YEEDPKTRKAVWKDEEEEQINVNIAKVNRLRKLRKEEDEGLISGSEYVLRLRAHHAKLNP
GTEWAQLDSQSKSDNYYDDESSDEENRVELARGYKDIEAADNILRTNEELVVKSSVKLLP
GLLEYSKLVDANAEDPSNGVINSVQFHRNAQLLLTAGSDRKVRFFQIDGKRNTKIQSIFL
DDCPIRRASFLPDGSQVIVAGRRKFFYSFDLVKAKFDKIGPLVGREEKSLEVFEVSPDSN
TIAFVGNEGYILLVSSRTKELIGTLKMNGTVRSLAFAEDGKQLLSSGGDGHMYHWDLRTR
RCIHKAVDEGCINSTVVCTSPNGSLFAAGSDSGIVNIYKREEFLGGKKKPIKTVENLTTR
VDFMKFNHDSQILAICSTVKNNSMKLIHIPSLTVFSNWPPQNAALRYPRCMDFSPAGGFM
AVGNAAGKVLLYKLHHYQNA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgataccgcggaatgtgaaatctaggagtgtaggcaaggtgaaaagggaggat
aatgatgaggctgcacttttggagaatgaaagaaacattgaaaatggaacagattctgat
ctagacatcacaaagacaaagaagagaaggaaagagaaagaaagggaagaagaaattgaa
caagaaaaagaaaggaagaagctggagaatttcttgtttggatctctctattcccctgtt
gtctttggaaaggaagaggaagaagaaaaggacggagatgatttatttgttgtggttcct
tctgcaaatagagaactaactgtttatgaaaatgatgacgggatttcagaagagagtggg
tatgaagaagacccaaagaccaggaaagcagtttggaaggacgaggaagaagaacagatc
aatgtgaatatagctaaagttaatcgattgaggaagctgaggaaagaagaagatgagggt
ttgatttctggttcagagtatgttttaagattgagggcccaccatgcgaagttgaatcct
ggcacagagtgggcccagcttgattcacaatccaagagtgataactattatgatgatgaa
tcgtcagatgaagaaaatagggttgaactggcccgtggttacaaagatattgaagctgct
gataatattcttcgaacaaatgaagaacttgtggtgaagagcagtgtcaaattgttgcct
ggactccttgagtattcaaaacttgtggatgcaaatgcggaggatccttcaaatggcgtg
attaactcagttcagttccatcgaaatgctcagttgctacttacagctggatcagatcga
aaggtcagatttttccagatcgatgggaaacgaaatacaaaaatacaaagcattttcctt
gatgattgcccaattaggagggcaagcttcttacctgatggttcacaagttattgtagct
ggaagaagaaagttcttttacagctttgatttggtgaaagcaaaatttgataaaataggt
cccttggttggtagggaggaaaaaagtttggaagttttcgaggtttcccctgattcaaat
acgattgcttttgtgggtaatgaaggttacatattgttggtttcttcgagaacaaaggaa
ctgattgggacgctaaaaatgaatgggactgttcgttctttagcctttgctgaggatggg
aagcaattattgagctctggaggagatggtcacatgtaccactgggacttgcgaacaaga
agatgcatccataaagctgttgatgagggctgcataaacagtactgtcgtttgcacttca
cctaatggaagtctttttgcagctggttcggatagcgggatagtgaacatctacaagagg
gaggagtttttgggtggaaagaaaaaaccaatcaagactgtcgagaatctgacgaccaga
gtggatttcatgaagtttaaccatgattctcagatattggcaatatgctccaccgtgaag
aacaacagcatgaagttaatacatatcccatcacttactgttttctccaactggcctccc
cagaacgcggcccttcgttatccccgttgtatggatttcagtcctgctggtggcttcatg
gctgtgggaaatgctgctggaaaagtgttgttgtacaagctgcaccattaccagaacgcg
tag
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integrated database retrieval system
