KEGG   Carica papaya (papaya): 110806727
Entry
110806727         CDS       T05151                                 
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03022  Basal transcription factors
cpap03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110806727
  09124 Replication and repair
   03420 Nucleotide excision repair
    110806727
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpap03021]
    110806727
   03400 DNA repair and recombination proteins [BR:cpap03400]
    110806727
Transcription machinery [BR:cpap03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     110806727
DNA repair and recombination proteins [BR:cpap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     110806727
SSDB
Motif
Pfam: MAT1
Other DBs
NCBI-GeneID: 110806727
NCBI-ProteinID: XP_021887342
LinkDB
Position
Unknown
AA seq 192 aa
MVVASSNPHNREMSIRRRISEIFNKREEDFASLREYNDYLEEVEDMVFNLIEGIDVEAIE
EKIKDYSQENAEQIMINRARKAEELAAAMAASKACPVQADNDGGANQTSQAGFNSGMQGQ
YAPTVPGGQPRPTGMGPQPLPLGGGLDHQGNYAIDDEEMMRLRAERGGRAGGWTAELSKR
RALEEAFGSIWI
NT seq 579 nt   +upstreamnt  +downstreamnt
atggtggtcgctagtagtaatcctcataatagggaaatgagcatcaggaggagaatcagt
gagattttcaacaaacgagaggaggattttgcatccttacgcgaatacaacgattacttg
gaagaagtggaggatatggtatttaacttgatagaaggaatagatgttgaagctattgaa
gagaaaattaaggattattctcaagagaatgccgagcaaataatgattaatcgagctcga
aaggctgaagaattagctgcagccatggcagcaagcaaagcatgtcctgtacaagcagat
aacgacgggggtgcaaaccagacctcccaggctgggtttaattctggtatgcaaggtcaa
tatgcccctacagttcctggaggacagccccggccaacaggcatgggccctcaacccttg
ccgcttggaggtggactggatcaccaaggtaattatgctattgatgatgaggaaatgatg
aggcttcgagcagagaggggtggacgggcagggggatggacagcagagttaagcaagagg
agagcactcgaagaagcatttgggagcatttggatttga

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