Carica papaya (papaya): 110807008
Help
Entry
110807008 CDS
T05151
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpap03016
]
110807008
Enzymes [BR:
cpap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
110807008
Transfer RNA biogenesis [BR:
cpap03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
110807008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
110807008
NCBI-ProteinID:
XP_021887719
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MMMAVRVVNSCFVLRSATVFPLSAIRFRSYYFRTLPFRRYSKLGPLSPVLWSEQQFLSHD
CRRTSCFHRLVESVMEELESSSRRKRVRTNVKVRLTSSGELLEDKLVNQEVQKGLLLEFK
KDSDRIVLAVAQRPDGKKNWMVFDQNGSTCSIKPQQITYIVPGVENFDPREISSFLQRAQ
ENLDPTLLEFAWVELLEKNKSITTEELAEIIFGTSDPLESYCAHLLLSKDELYFTVLETK
GYRSIYGPRPISQVEELLRRKLAKEADEKELQDFVQLLTSARKMCSHSKPTKSSWMSQEK
VKQKIECLEAYAIDACKSNDQRKTAGMILKAMGLAKTAVSAVNLLIDIGYFPVHVNLDLL
KLNIPTCHTDEIIAAAESVLLESYDLDEMSRKDLTHLKVYAIDVDEADELDDALSATRLQ
DGRIKVWIHVADPARYVQPGTIVDREAMRRGTSVFLPTATYPMFPEKLAMEGMSLKQGEL
CNAVTVSVTLRSDGSIAEYSVDNSIIKPTYMLTYESATELLQLQLEEEVELKILSEAADL
RLRWRREQVGFCISLIVDSELQCCKYSFVTDLDVDVSSHVSQHEFNPEKLEPSINLYVEN
QADPAMRLVSEMMILCGEAIACFGSYNNIPLPYRGQPQSSIDVSAFAHLPEGPVRSSAII
RIMRAAEINFKNPVRHGVLGLPGYVQFTSPIRRYMDLLAHYQVKAFLRCDSLPFSSGQLE
GIASIVNMRARTVKKLSSSSLRYWILEFLRGQPKERRYRALILRFIKDRIAALLLVEVGL
QGSAWVSIGTQIGDEVEVRVEEAHPRDDALSLKEVV
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggcagttagggtcgttaatagctgttttgttcttcgctctgctacggttttc
cctctctcggccattcggttccgttcctactatttcaggaccttgccgtttcgccgttac
tcgaaattagggcctctgtccccggtattgtggtctgaacagcagtttcttagccatgat
tgccgacgaacttcctgctttcacaggctcgttgaaagcgttatggaagagctcgaatcc
tctagccggcggaagagagttcgcacaaacgttaaggtgagattgacaagtagtggagag
cttcttgaagataagcttgtaaaccaagaagtacagaaaggtttgctgctggagttcaag
aaggattctgataggatagtacttgcagttgctcaaaggcccgatgggaagaagaattgg
atggtctttgatcagaatggttctacatgttccattaaacctcaacagattacatatatt
gtccctggagttgaaaattttgatcccagagagatttcaagctttctccagagagctcag
gagaacttggacccaacactgcttgagtttgcatgggttgagcttcttgagaagaataaa
tcaattacaacagaagaattagcagagataatttttggtacttcagatcctcttgagagc
tactgtgcccatcttttgctatcaaaagatgaattatatttcactgtgttggagacaaaa
ggctatcgttctatttatgggcctcgacctatttctcaagtggaggaacttctacgtcgg
aagcttgcgaaggaggctgatgaaaaagaacttcaggactttgtgcaactactgacatct
gctaggaaaatgtgttcacattctaaacctacaaaatcttcgtggatgagtcaagagaaa
gtcaaacagaaaattgagtgtcttgaagcatatgctattgatgcatgcaaaagcaatgac
caaagaaaaaccgcgggaatgatcctcaaggcaatgggcctggcaaaaactgctgtctct
gcagtaaatctcctcatagatatcgggtactttcctgtgcatgtaaacctggatctgtta
aagctgaacattcctacctgtcatacagatgagattatagcagctgctgaaagtgttctt
ttagaatcatatgatctagatgagatgagcagaaaagaccttactcatttgaaggtttat
gccattgatgttgatgaggctgatgagcttgatgatgctctgagtgcaacaaggttgcag
gatggccgcattaaagtgtggatacatgttgctgatccagctagatatgttcaacctggg
accattgtagatagggaggccatgagaaggggaacctctgtcttcttgcccactgccact
tatcctatgtttccagagaaacttgcgatggagggaatgagtttgaaacaaggagagctt
tgcaatgctgttacagtatctgttactttgcgttctgatggcagcattgcagaatactca
gttgataactcaatcattaaaccaacatatatgctgacatatgagagtgcaactgagcta
cttcaattacaattggaagaggaggttgaactgaagattctatctgaagcagctgatctc
aggttacggtggcgccgtgaacaggttggtttctgtatctcacttattgtggactcagaa
ttgcagtgctgtaagtatagctttgttactgacctggacgtagatgtgtcttcccatgta
tctcaacatgaatttaatccagagaagctagaaccatcaattaatctctatgttgaaaat
caggcagacccagcaatgcgacttgtttctgagatgatgatactctgtggggaagctata
gcctgttttggctcttacaataacattccattaccatatagaggacagccccaatcgagc
attgatgtatctgcatttgcacatcttccagaaggaccagttcggagctctgccattatc
agaataatgcgtgctgctgaaattaatttcaagaatcctgtacgccatggtgttcttggg
cttcctggttatgttcagtttacttctcctattcgtagatatatggacctccttgctcac
tatcaggtgaaagcatttttaagatgtgatagtcttccgttttcatctggtcaactagaa
gggatagcatcgatagtaaacatgcgggcaagaacagtaaagaaactcagcagcagcagc
cttcggtattggatattagaattcttgagaggacaaccaaaggagagacggtatcgggca
ttaattctcagattcatcaaagatcggatagcagccttattacttgttgaggtgggactt
caaggatctgcatgggtgtcaatagggacacagataggagatgaagtagaagttcgagtg
gaagaagcgcatccgcgtgatgacgctctttcacttaaggaagttgtctag
DBGET
integrated database retrieval system
